Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda14g00079 | ATGGGAAAGGAGAAGGTTCACATCAACATTGTGGTCATTGGCCATGTCGACTCTGGGAAATCCACCACCACTGGGCACTTGATTTACAAGCTCGGTGGTATCGACAAGCGTGTCATTGAGAGATTTGAGAAAGAAGCTGCAGAGATGAACAAGCGATCATTTAAGTATGCTTGGGTGTTGGACAAGCTGAAGGCTGAGCGTGAGCGTGGTATCACCATTGATATTGCCTTGTGGAAGTTCGAAACCACAAAATACTATTGCACTGTTATTGATGCCCCTGGACATCGTGATTTTATCAAAAACATGATTACTGGAACTTCCCAAGCTGATTGTGCTGTCCTTATCATTGATTCAACAACTGGAGGGTTCGAAGCAGGTATTTCAAAGGATGGTCAAACTCGTGAGCATGCTCTTCTTGCCTTCACCCTTGGAGTAAGGCAAATGATATGCTGCTGCAACAAGATGGACGCCACAACTCCCAAATATTCTAAGGCAAGGTATGACGAAATTGTGAAGGAAGTGTCCTCCTACATGAAGAAGGTTGGTTATAACCCTGATAAAATTCCCTTCGTCCCCATCTCTGGGTTTGAAGTTGAAATGCACCATGAGGCTCTGCAAGAAGCTCTTCCAGGGGATAACGTTGGTTTCAACGTTAAGAATGTTGCAGTGAAGGATCTCAAGCGTGGTTTTGTTGCCTCTAATTCTAAGGATGATCCTGCTAGAGAAGCAGCCAACTTCACCTCCCAAGTTATTATCATGAACCACCCTGGCCAAATTGGAAATGGTTATGCACCTGTTCTCGATTGTCACACCTGCCACATTGCTGTCAAATTTGCAGAGATATTAACCAAGATAGACAGGAGATCTGGACTTGAGCAAAGAGTAAACGAGATAGAACAATTTTACTCGACTATGAATGTAAAGCAACCTAATGCATCTAAAAGTAGCTCAGTAGTCAAAGACAAGGATAAGGAGAGGCATGTACCGAGTCTCAAAAAGCAGCAGCAGGATGCAACACGTAGGGAAGCAGCTGCTGCAAAGAGAATGCTGGAGCTCATGCGCCAATTTGGCACCATATTGCGCCAGTACTTTACAACTGCATTTGATTTTCATCATTCTTTGATGTTGATTGATTGTCTCGCCTGTAAGATTACCCAGCACAAGTGGGCTTGGCCCTTTATGCAACCTGTAGATGTGGAAGGTCTTGAACTACATGATTATTACGAGGTTATTGATAAGCCAATGGATTTCAGTACCATAAAAAATCAAATGGAGGCTAAGGATGGTACTGGATATAAGAACGTTCGAGAAATATGTTCTGATGTGAGACTAGTTTTTAAGAATGCAATGAAATATAATGATGATAGAAGTGATGTGCATGTCATGGCAAAAACTTTAATGGCAAAGTTTGAGGAAAAGTGGCTGCAACTCCTACCCAAAGTCACTGAAGAGGAAAAACGAAGAGAAGATGAAGAAGCGGAGGCACAAATGGATATGCAGCTTGCACAGGAAGCTGCTCATGCGAGGATGGCTCGAGACATTAGTAATGAACTCTATGAGGTTGATATGCAGTTGGAAGAACTACGGGAAATGGTTGTTCGAAAGTGCAGAAAATTATCAACTGAAGAGAAGAGAACACTAGGAATAGCACTCACCAAACTGTCCCCAGAAGATCTGAGCAAAGTATTGGAGATAGTTGCCCAAAATAACCCGAGTTTCCAAGCGGCGGCCGAAGAGGTGGATCTTGACATTGATGCTCAGAGTGAAACTACCCTTTGGAGATTGAAGTTTTTTGTGAAGGAGGCTTTAGAAATTCAAGGCAAGAGCGCAGTAAGCACTGGTGGGAACAGTAACCAAACTACTTTGAACAATTTTAAAAATGGCGCCAACGCGACCACGGCGACGACCACAAATAACAACAATCATAACAAACGGAGAAAGGAAATATGCGATGCTGTTGCCAGAACTGTCAATAAAAAGGCTAAAAAACTCTCTGCTTGA | 2001 | 42.98 | MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVRQMICCCNKMDATTPKYSKARYDEIVKEVSSYMKKVGYNPDKIPFVPISGFEVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFAEILTKIDRRSGLEQRVNEIEQFYSTMNVKQPNASKSSSVVKDKDKERHVPSLKKQQQDATRREAAAAKRMLELMRQFGTILRQYFTTAFDFHHSLMLIDCLACKITQHKWAWPFMQPVDVEGLELHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFKNAMKYNDDRSDVHVMAKTLMAKFEEKWLQLLPKVTEEEKRREDEEAEAQMDMQLAQEAAHARMARDISNELYEVDMQLEELREMVVRKCRKLSTEEKRTLGIALTKLSPEDLSKVLEIVAQNNPSFQAAAEEVDLDIDAQSETTLWRLKFFVKEALEIQGKSAVSTGGNSNQTTLNNFKNGANATTATTTNNNNHNKRRKEICDAVARTVNKKAKKLSA | 666 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 613788 | 623300 | - | Bda026812.2 | Bda14g00079 | 20130 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda14g00079 | 666 | PRINTS | Bromodomain signature | 441 | 460 | IPR001487 | GO:0005515 | |
Bda14g00079 | 666 | PRINTS | Bromodomain signature | 388 | 401 | IPR001487 | GO:0005515 | |
Bda14g00079 | 666 | PRINTS | Bromodomain signature | 404 | 420 | IPR001487 | GO:0005515 | |
Bda14g00079 | 666 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 243 | 290 | IPR009001 | - | |
Bda14g00079 | 666 | ProSiteProfiles | Bromodomain profile. | 385 | 460 | IPR001487 | GO:0005515 | |
Bda14g00079 | 666 | Pfam | Elongation factor Tu C-terminal domain | 240 | 291 | IPR004160 | - | |
Bda14g00079 | 666 | PRINTS | GTP-binding elongation factor signature | 9 | 22 | IPR000795 | GO:0003924|GO:0005525 | |
Bda14g00079 | 666 | PRINTS | GTP-binding elongation factor signature | 88 | 98 | IPR000795 | GO:0003924|GO:0005525 | |
Bda14g00079 | 666 | PRINTS | GTP-binding elongation factor signature | 68 | 76 | IPR000795 | GO:0003924|GO:0005525 | |
Bda14g00079 | 666 | PRINTS | GTP-binding elongation factor signature | 148 | 157 | IPR000795 | GO:0003924|GO:0005525 | |
Bda14g00079 | 666 | PRINTS | GTP-binding elongation factor signature | 104 | 115 | IPR000795 | GO:0003924|GO:0005525 | |
Bda14g00079 | 666 | MobiDBLite | consensus disorder prediction | 317 | 340 | - | - | |
Bda14g00079 | 666 | PANTHER | ELONGATION FACTOR 1-ALPHA 1 | 1 | 196 | - | - | |
Bda14g00079 | 666 | PANTHER | ELONGATION FACTOR 1-ALPHA 1 | 198 | 290 | - | - | |
Bda14g00079 | 666 | SUPERFAMILY | Translation proteins | 197 | 239 | IPR009000 | - | |
Bda14g00079 | 666 | Gene3D | - | 533 | 608 | IPR038336 | - | |
Bda14g00079 | 666 | Gene3D | Translation factors | 241 | 327 | - | - | |
Bda14g00079 | 666 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 5 | 218 | IPR000795 | GO:0003924|GO:0005525 | |
Bda14g00079 | 666 | Gene3D | - | 330 | 504 | IPR036427 | GO:0005515 | |
Bda14g00079 | 666 | MobiDBLite | consensus disorder prediction | 609 | 646 | - | - | |
Bda14g00079 | 666 | Pfam | Elongation factor Tu GTP binding domain | 6 | 201 | IPR000795 | GO:0003924|GO:0005525 | |
Bda14g00079 | 666 | CDD | EF1_alpha | 9 | 197 | - | - | |
Bda14g00079 | 666 | MobiDBLite | consensus disorder prediction | 309 | 340 | - | - | |
Bda14g00079 | 666 | ProSiteProfiles | NET domain profile. | 529 | 610 | IPR027353 | - | |
Bda14g00079 | 666 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 61 | 76 | IPR031157 | - | |
Bda14g00079 | 666 | Pfam | Bromodomain extra-terminal - transcription regulation | 538 | 601 | IPR027353 | - | |
Bda14g00079 | 666 | Gene3D | - | 1 | 213 | IPR027417 | - | |
Bda14g00079 | 666 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 3 | 197 | IPR027417 | - | |
Bda14g00079 | 666 | MobiDBLite | consensus disorder prediction | 609 | 640 | - | - | |
Bda14g00079 | 666 | Pfam | Bromodomain | 383 | 464 | IPR001487 | GO:0005515 | |
Bda14g00079 | 666 | SUPERFAMILY | Bromodomain | 383 | 484 | IPR036427 | GO:0005515 | |
Bda14g00079 | 666 | SMART | bromo_6 | 364 | 479 | IPR001487 | GO:0005515 | |
Bda14g00079 | 666 | PANTHER | TRANSLATION FACTOR | 1 | 196 | - | - | |
Bda14g00079 | 666 | PANTHER | TRANSLATION FACTOR | 198 | 290 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda14g00079 | Bda-Chr14:613788 | Bda11g01796 | Bda-Chr11:52978885 | 2.87E-53 | dispersed | |
Bda13g01636 | Bda-Chr13:39838990 | Bda14g00079 | Bda-Chr14:613788 | 7.60E-13 | transposed | |
Bda14g00079 | Bda-Chr14:613788 | Bda15g00380 | Bda-Chr15:6732927 | 1.70E-56 | wgd | |
Bda14g00079 | Bda-Chr14:613788 | Bda02g00774 | Bda-Chr2:48458204 | 1.60E-57 | wgd | |
Bda14g00079 | Bda-Chr14:613788 | Bda09g01471 | Bda-Chr9:46517877 | 6.44E-56 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda14g00079 | - | - | csv:101212878 | 548.51 |