Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00128 ATGGCTGATGCTGAGGACATTCAACCTCTTGTATGTGACAATGGGACAGGAATGGTTAAGGCTGGATTTGCAGGAGACGACGCACCTCGAGCTGTTTTTCCTAGCATTGTAGGTCGTCCTCGCCACACTGGTGTGATGGTTGGTATGGGTCAGAAAGATGCCTACGTTGGTGATGAGGCTCAATCAAAACGTGGTATTTTGACACTGAAATATCCAATTGAGCATGGTATTGTCAGCAACTGGGATGATATGGAAAAGATCTGGCATCATACTTTCTACAATGAGCTCCGAGTTGCCCCAGAGGAGCACCCTGTGCTCCTAACTGAGGCGCCTCTTAACCCAAAGGCTAACCGTGAGAAAATGACGCAAATCATGTTTGAAACCTTCAATACTCCTGCTATGTATGTAGCCATTCAAGCTGTACTTTCACTGTATGCTAGTGGCCGTACAACTGGTATCGTGTTGGATTCAGGTGATGGTGTCAGTCATACAGTTCCTATCTATGAAGGATATGCTCTTCCACATGCCATTCTTCGCCTTGATTTGGCTGGGCGTGATCTCACTGATAACTTGATGAAAATTCTCACCGAGCGTGGGTACTCTTTTACTACCACAGCTGAGCGTGAAATTGTGAGGGATATGAAGGAAAAGTTGGCATATATTGCTCTTGACTATGAGCAGGAAATGGAAACTGCCAAGACTAGCTCATCTGTTGAGAAGAGCTATGAGCTGCCTGATGGGCAGGTCATCACCATTGGTGCTGAACGATTCCGATGCCCAGAGGTTCTCTTCCAGCCATCAATGATTGGAATGGAAGCAGCGGGCATTCATGAAACTACCTACAATTCCATCATGAAGTGTGATGTAGATATCAGGAAAGACCTGTATGGAAACATAGTCCTTTCTGGTGGTTCAACCATGTTCCCAGGAATTGCTGATAGAATGAGTAAGGAAATTTCGGCTCTCGCCCCCAGCAGCATGAAGATTAAAGTTGTGGCACCCCCAGAGAGAAAATACAGTGTCTGGATTGGAGGCTCCATATTGGCTTCTTTGAGCACCTTCCAGCAGATGTGGATTGCCAAGGCAGAGTATGATGAATCTGGGCCATCAATTGTGCATAGGAAGTGCTTCTAA 1134 46.12 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQEMETAKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 873558 875189 + Bda026860.1 Bda14g00128 20179
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00128 377 Pfam Actin 5 377 IPR004000 -
Bda14g00128 377 SUPERFAMILY Actin-like ATPase domain 149 377 IPR043129 -
Bda14g00128 377 SUPERFAMILY Actin-like ATPase domain 6 155 IPR043129 -
Bda14g00128 377 ProSitePatterns Actins and actin-related proteins signature. 106 118 IPR020902 -
Bda14g00128 377 SMART actin_3 7 377 IPR004000 -
Bda14g00128 377 ProSitePatterns Actins signature 2. 358 366 IPR004001 -
Bda14g00128 377 Gene3D - 140 340 - -
Bda14g00128 377 Gene3D - 10 371 - -
Bda14g00128 377 PANTHER ACTIN 1 376 IPR004000 -
Bda14g00128 377 Gene3D Actin; Chain A, domain 4 182 273 - -
Bda14g00128 377 PANTHER ACTIN-97 1 376 - -
Bda14g00128 377 CDD NBD_sugar-kinase_HSP70_actin 10 183 - -
Bda14g00128 377 ProSitePatterns Actins signature 1. 55 65 IPR004001 -
Bda14g00128 377 PRINTS Actin signature 51 62 IPR004000 -
Bda14g00128 377 PRINTS Actin signature 238 254 IPR004000 -
Bda14g00128 377 PRINTS Actin signature 63 85 IPR004000 -
Bda14g00128 377 PRINTS Actin signature 142 161 IPR004000 -
Bda14g00128 377 PRINTS Actin signature 28 37 IPR004000 -
Bda14g00128 377 PRINTS Actin signature 117 130 IPR004000 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01592 Bda-Chr3:55221205 Bda14g00128 Bda-Chr14:873558 0 dispersed
Bda05g01088 Bda-Chr5:59231392 Bda14g00128 Bda-Chr14:873558 0 dispersed
Bda14g00128 Bda-Chr14:873558 Bda15g00357 Bda-Chr15:6440329 0 dispersed
Bda10g00975 Bda-Chr10:44008815 Bda14g00128 Bda-Chr14:873558 4.38E-65 transposed
Bda12g00453 Bda-Chr12:5600631 Bda14g00128 Bda-Chr14:873558 2.38E-112 transposed
Bda04g00339 Bda-Chr4:48461589 Bda14g00128 Bda-Chr14:873558 0 transposed
Bda05g00455 Bda-Chr5:50845297 Bda14g00128 Bda-Chr14:873558 1.22E-69 transposed
Bda05g00660 Bda-Chr5:54948986 Bda14g00128 Bda-Chr14:873558 8.73E-42 transposed
Bda06g00486 Bda-Chr6:6880846 Bda14g00128 Bda-Chr14:873558 2.68E-83 transposed
Bda11g01374 Bda-Chr11:16934926 Bda14g00128 Bda-Chr14:873558 0 transposed
Bda14g00128 Bda-Chr14:873558 Bda14g00291 Bda-Chr14:1975728 1.32E-10 wgd
Bda14g00128 Bda-Chr14:873558 Bda15g00349 Bda-Chr15:6357586 0 wgd
Bda14g00128 Bda-Chr14:873558 Bda09g01504 Bda-Chr9:46817275 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00128 K10355 - csv:101220611 755.747