Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00139 ATGAGTTTTGTTTTTCGTGGAACAAGAGCTCCAGATATTGAAAGTGGTTTATCTGGGTATACCTCAGAGCGGCGTGCCTTGCGTGTTCACAATGGACGTCCTGTTAATTCCAACTCCCTTGCTTTTCTTGTCACAGTTCTGTTGCTATTCATGATACTTAACTCACATCAGATGTCTCCCAACTTTCTGCTTTGGCTTGTACTTGGTGTCTTTCTGATGGCCACCACCTTGAGAATGTATGCCACTTGTCAACAACTTCAAGCTCAGGCCCAAGCTCATGCTATGGCAGCCAGTGGCATTCTTGGTCACACTGAACTGCGGTTGCATATGCCACATTCTATTGCACTTGCAACGAGGGGGCGTTTGCAGGGCCTTAGACTTCAGCTTGCAGTACTTGACAGGGAATTTGATGATTTAGATTATGAAACCTTGAGAGCATTGGATTCCGACAATGCTCCATCAGCTCTATCAATGAGCGAAGAAGAAATAAACACTCTTCCAGTTCACCAGTACAAGATTGCTGGTTCTCAAAATGGAAATTCATTGGTTCAACAAGGCTCGTCTTCTACATCTGTTGAGGAAAAACAAGACTCTACTAATCCAGTGGGTTGTACAAATGGCTCAGAGGATGAACTAACCTGCAGTGTTTGCTTGGAGCAAGTTAACGTTGGAGAACTCATTCGTAGTTTGCCATGCATGCATCAGTTCCATGTTACTTGCATTGATCCGTGGTTGCGGCAACAAGGGACATGCCCGGTCTGTAAGTTTAGGGCGGGGTCTGGATGGCATGAACAAGGCGAAAATGATTCTTCTTTCATGGTCTGA 825 45.09 MSFVFRGTRAPDIESGLSGYTSERRALRVHNGRPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQAHAMAASGILGHTELRLHMPHSIALATRGRLQGLRLQLAVLDREFDDLDYETLRALDSDNAPSALSMSEEEINTLPVHQYKIAGSQNGNSLVQQGSSSTSVEEKQDSTNPVGCTNGSEDELTCSVCLEQVNVGELIRSLPCMHQFHVTCIDPWLRQQGTCPVCKFRAGSGWHEQGENDSSFMV 274
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 967873 970228 - Bda026872.1 Bda14g00139 20190
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00139 274 Pfam Ring finger domain 213 255 IPR001841 -
Bda14g00139 274 MobiDBLite consensus disorder prediction 179 204 - -
Bda14g00139 274 ProSiteProfiles Zinc finger RING-type profile. 214 255 IPR001841 -
Bda14g00139 274 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SDIR1 1 273 - -
Bda14g00139 274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 189 260 IPR013083 -
Bda14g00139 274 PANTHER TARGET OF ERK KINASE MPK-1 1 273 - -
Bda14g00139 274 CDD RING-H2_PA-TM-RING 213 255 - -
Bda14g00139 274 SUPERFAMILY RING/U-box 209 258 - -
Bda14g00139 274 SMART ring_2 214 254 IPR001841 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00139 Bda-Chr14:967873 Bda11g01819 Bda-Chr11:53376368 8.98E-13 dispersed
Bda14g00139 Bda-Chr14:967873 Bda01g00979 Bda-Chr1:43419273 5.08E-12 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00139 K16283 - csv:101216306 427.943