Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda14g00146 | ATGGCTGAAATTTGCTGCGAGCTTGTCGGGGAAGGTGAAACTTCTGCTACAGTAGAGCCCAGCTCTCTACCTTCGAGACGTCGGAGAATGGAGGCTTGTCCTATTGCATTAATGGCGGACGCTCCTCTCTCGCCTCAGGCGCTCGAGAGCAGCCGAAAACGCCTCAAAGCCGATATCAACTTGCGTGACAGTGGAAACGCCGTGGAGAGTTGTATTCCTGCGATCCATAAGATTGAAGAAAGGGATGAAGAAGATTCAGGTGAGGGAAAGAATCTCTGTACGAATCCATCTGTTCCTCACTCGAAAACTTCGAAGATGGATCTTATGGATGATGAAATTCGACGTCCTAAGTTCGGGGTGACCGCCGTTCGTGGAAGGAGGAGAGAAATGGAAGATGCGGTCTCAGTTCAACTATCTTTTTGCGATCATGAAGGTGGTGATTCTGAAAAACTCCATCTTTTCGGAGTGTTCGACGGCCATGGTTGCTCTCATGTGGCGATGAAGTGTAAGAAACGATTACATGAGATTGTAAAAGAAGAGATTAAACAAGAAGGTGAGCACGTGGACTGGAAGAGAACGATGGAGAGGTGCTATTTTCGAATGGACGAGGAGGTGAAGCAGTGCTCTAATGAAGCCAGAGGCTCAAATTGTAGGTGCGAACTTCAAGCTTCACAGAGCGACGCCGTTGGATCCACAGCTGTTATAGCTGTAGTCACCCCCGACAAAATTATCGTCTCCAACTGCGGCGACTCCCGCGCGGTGCTTTGCAGGAAGGGGAAAGCAATCCCTCTCTCATCTGACCACAAGCCCGATAGACCAGACGAACTGGAGCGGATCGAAGCCGCCGGTGGGAGGGTGATTTATTGGGACGGAGCAAGAGTCCTCGGAGTCCTAGCAATGTCCAGAGCCATAGGAGATAATTACCTAAAACCATACGTCATCCCGGAACCGGAGGTGACAATAACAGATCGGACGGCAGAGGACGAGTGTCTAATCTTAGCAAGCGACGGACTTTGGGACGTAGTAAAAAACGAAACAGCCTGCGGTGTCGCGCGCATGTGCCTCCGATCGCAGAGCAAGGCATCGTCGGGAAGAGATGTGGCAACGGATGGTGGCGAAGAGTTGCCGGACAAGGGATGTTCGGACGCCTCAATATTGCTGACGAAGTTGGCACTGGCCAGGCATAGTTCAGATAACATCAGCGTTGTGGTCGTCGATCTGAGGAAATGA | 1230 | 50.98 | MAEICCELVGEGETSATVEPSSLPSRRRRMEACPIALMADAPLSPQALESSRKRLKADINLRDSGNAVESCIPAIHKIEERDEEDSGEGKNLCTNPSVPHSKTSKMDLMDDEIRRPKFGVTAVRGRRREMEDAVSVQLSFCDHEGGDSEKLHLFGVFDGHGCSHVAMKCKKRLHEIVKEEIKQEGEHVDWKRTMERCYFRMDEEVKQCSNEARGSNCRCELQASQSDAVGSTAVIAVVTPDKIIVSNCGDSRAVLCRKGKAIPLSSDHKPDRPDELERIEAAGGRVIYWDGARVLGVLAMSRAIGDNYLKPYVIPEPEVTITDRTAEDECLILASDGLWDVVKNETACGVARMCLRSQSKASSGRDVATDGGEELPDKGCSDASILLTKLALARHSSDNISVVVVDLRK | 409 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 997516 | 998918 | + | Bda026879.1 | Bda14g00146 | 20197 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda14g00146 | 409 | ProSitePatterns | PPM-type phosphatase domain signature. | 153 | 161 | IPR000222 | GO:0043169 | |
| Bda14g00146 | 409 | PANTHER | PROTEIN PHOSPHATASE 2C 37 | 47 | 409 | - | - | |
| Bda14g00146 | 409 | MobiDBLite | consensus disorder prediction | 79 | 104 | - | - | |
| Bda14g00146 | 409 | Pfam | Protein phosphatase 2C | 118 | 381 | IPR001932 | - | |
| Bda14g00146 | 409 | SUPERFAMILY | PP2C-like | 115 | 408 | IPR036457 | - | |
| Bda14g00146 | 409 | Gene3D | - | 107 | 409 | IPR036457 | - | |
| Bda14g00146 | 409 | SMART | PP2C_4 | 107 | 405 | IPR001932 | - | |
| Bda14g00146 | 409 | CDD | PP2Cc | 117 | 407 | IPR001932 | - | |
| Bda14g00146 | 409 | PANTHER | ALPHABET, ISOFORM E-RELATED | 47 | 409 | - | - | |
| Bda14g00146 | 409 | ProSiteProfiles | PPM-type phosphatase domain profile. | 117 | 407 | IPR001932 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda05g00029 | Bda-Chr5:2081279 | Bda14g00146 | Bda-Chr14:997516 | 1.11E-35 | dispersed | |
| Bda14g00146 | Bda-Chr14:997516 | Bda01g00652 | Bda-Chr1:33517281 | 1.50E-47 | dispersed | |
| Bda03g00136 | Bda-Chr3:1182055 | Bda14g00146 | Bda-Chr14:997516 | 4.41E-83 | transposed | |
| Bda08g00467 | Bda-Chr8:4883071 | Bda14g00146 | Bda-Chr14:997516 | 8.89E-89 | transposed | |
| Bda09g01128 | Bda-Chr9:41965633 | Bda14g00146 | Bda-Chr14:997516 | 2.04E-86 | transposed | |
| Bda10g00866 | Bda-Chr10:43167648 | Bda14g00146 | Bda-Chr14:997516 | 2.29E-81 | transposed | |
| Bda14g00146 | Bda-Chr14:997516 | Bda02g00832 | Bda-Chr2:48900353 | 2.38E-116 | wgd | |
| Bda14g00146 | Bda-Chr14:997516 | Bda07g00571 | Bda-Chr7:7048753 | 1.07E-128 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda14g00146 | K14497 | - | egr:104454324 | 491.115 |