Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00187 ATGGGAAGAACACACGTGGGTCCTCATGGAGTCCTAAACACCATAACGCCATGCGCAGCCTGTAAGCTTCTTAGACGAAGATGCGCGCAGGAGTGTCCTTTTTCTCCATATTTCTCTCCCCATGAGCCTCAAAAGTTTGCTTCTGTTCACAAAGTCTTCGGCGCCAGCAACGTCTCCAAGATGCTAATGGAGGTGTCGGAGAGTCAAAGAGCAGACGCTGCTAATAGCCTAGTTTACGAAGCCAACTTGAGGCTAAGAGACCCAGTCTATGGCTGCATGGGTGCGATTTTAGCTCTGCAACAGCAAGTTCAGTCTTTAGAAGCTGAGCTTAATGCAGTAAGGACTCAAATAATGAAACTCAAGTACAGTGAATCTAATATTCTACCTACTTCTCAAGTCACTTTTCTCAATTCTCCCGGAGCTGTTTCAGTCGCTGCACCGCCACATCCGCCGCCGTCAACCCCGCCATCACCACTTGCCCTTCCTCCCCTTTCCTCATCTTCTGTCTACCACCAGTCTACCACCACCAACGACCACCGTACTATGTCCTCTCAAAATATTGCCTACTTTGCCTGA 576 48.96 MGRTHVGPHGVLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVSESQRADAANSLVYEANLRLRDPVYGCMGAILALQQQVQSLEAELNAVRTQIMKLKYSESNILPTSQVTFLNSPGAVSVAAPPHPPPSTPPSPLALPPLSSSSVYHQSTTTNDHRTMSSQNIAYFA 191
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1337488 1338167 - Bda026923.1 Bda14g00187 20238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00187 191 ProSiteProfiles LOB domain profile. 16 117 IPR004883 -
Bda14g00187 191 PANTHER LOB DOMAIN-CONTAINING PROTEIN 15 7 190 - -
Bda14g00187 191 Coils Coil 96 123 - -
Bda14g00187 191 MobiDBLite consensus disorder prediction 141 185 - -
Bda14g00187 191 MobiDBLite consensus disorder prediction 163 185 - -
Bda14g00187 191 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 190 - -
Bda14g00187 191 MobiDBLite consensus disorder prediction 144 162 - -
Bda14g00187 191 Pfam Lateral organ boundaries (LOB) domain 17 114 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00557 Bda-Chr6:7837306 Bda14g00187 Bda-Chr14:1337488 2.56E-26 dispersed
Bda14g00187 Bda-Chr14:1337488 Bda14g01169 Bda-Chr14:11021002 4.25E-46 dispersed
Bda15g00586 Bda-Chr15:9068803 Bda14g00187 Bda-Chr14:1337488 1.19E-28 dispersed
Bda14g00187 Bda-Chr14:1337488 Bda14g00213 Bda-Chr14:1466564 1.55E-74 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16993 PF03195 LOB 1.70E-40 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00187 - - vvi:100251929 254.603