Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda14g00187 | ATGGGAAGAACACACGTGGGTCCTCATGGAGTCCTAAACACCATAACGCCATGCGCAGCCTGTAAGCTTCTTAGACGAAGATGCGCGCAGGAGTGTCCTTTTTCTCCATATTTCTCTCCCCATGAGCCTCAAAAGTTTGCTTCTGTTCACAAAGTCTTCGGCGCCAGCAACGTCTCCAAGATGCTAATGGAGGTGTCGGAGAGTCAAAGAGCAGACGCTGCTAATAGCCTAGTTTACGAAGCCAACTTGAGGCTAAGAGACCCAGTCTATGGCTGCATGGGTGCGATTTTAGCTCTGCAACAGCAAGTTCAGTCTTTAGAAGCTGAGCTTAATGCAGTAAGGACTCAAATAATGAAACTCAAGTACAGTGAATCTAATATTCTACCTACTTCTCAAGTCACTTTTCTCAATTCTCCCGGAGCTGTTTCAGTCGCTGCACCGCCACATCCGCCGCCGTCAACCCCGCCATCACCACTTGCCCTTCCTCCCCTTTCCTCATCTTCTGTCTACCACCAGTCTACCACCACCAACGACCACCGTACTATGTCCTCTCAAAATATTGCCTACTTTGCCTGA | 576 | 48.96 | MGRTHVGPHGVLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVSESQRADAANSLVYEANLRLRDPVYGCMGAILALQQQVQSLEAELNAVRTQIMKLKYSESNILPTSQVTFLNSPGAVSVAAPPHPPPSTPPSPLALPPLSSSSVYHQSTTTNDHRTMSSQNIAYFA | 191 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 1337488 | 1338167 | - | Bda026923.1 | Bda14g00187 | 20238 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda14g00187 | 191 | ProSiteProfiles | LOB domain profile. | 16 | 117 | IPR004883 | - | |
Bda14g00187 | 191 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 15 | 7 | 190 | - | - | |
Bda14g00187 | 191 | Coils | Coil | 96 | 123 | - | - | |
Bda14g00187 | 191 | MobiDBLite | consensus disorder prediction | 141 | 185 | - | - | |
Bda14g00187 | 191 | MobiDBLite | consensus disorder prediction | 163 | 185 | - | - | |
Bda14g00187 | 191 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 7 | 190 | - | - | |
Bda14g00187 | 191 | MobiDBLite | consensus disorder prediction | 144 | 162 | - | - | |
Bda14g00187 | 191 | Pfam | Lateral organ boundaries (LOB) domain | 17 | 114 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda06g00557 | Bda-Chr6:7837306 | Bda14g00187 | Bda-Chr14:1337488 | 2.56E-26 | dispersed | |
Bda14g00187 | Bda-Chr14:1337488 | Bda14g01169 | Bda-Chr14:11021002 | 4.25E-46 | dispersed | |
Bda15g00586 | Bda-Chr15:9068803 | Bda14g00187 | Bda-Chr14:1337488 | 1.19E-28 | dispersed | |
Bda14g00187 | Bda-Chr14:1337488 | Bda14g00213 | Bda-Chr14:1466564 | 1.55E-74 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16993 | PF03195 | LOB | 1.70E-40 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda14g00187 | - | - | vvi:100251929 | 254.603 |