Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00191 ATGGAGGATGCTGCTTTCCCTTCTCTATGCATTAAACTTCTAGTCCTCAGCCTTAGCCTTGGCGCCACTTATGGACAGTGGGAGAGCGGCCATGCCACATTCTACGGCGGTGGCGATGCATCTGGCACCATGGGTGGAGCTTGTGGGTATGGGAACTTGTATAGCCAAGGGTATGGGACCAACACTGCCGCGTTGAGCACCGCCCTGTTCAACAACGGACTAAGCTGCGGGAGCTGCTACGAGCTCACTTGCACTAACGATCCAAGATCGTGCATTCCTGGCTCTATTATCGTCACCGCTACCAACTTTTGCCCACCTAACTTCGCTTTGGCCAATGACCATGGCGGCTGGTGCAATCCTCCTCTCCCGCACTTCGATTTGGCCGAGCCTGCTTTCCTCCAAATCGCTCAGTATCGCGCGGGAATTGTTCCAGTATCCTACAGAAGGGTCCCCTGTTTGAAGAAAGGAGGAATAAGGTTCACCATTAACGGACACTCTTACTTCCTCTTAGTTCTGGTGACGAACGTAGGCGGTGCAGGAGATGTCCATTCAGTGTCAATCAAGGGATCAAGGGGAGGGTGGCAGGCAATGTCAAGGAACTGGGGACAGAACTGGCAGAGCAACTCCGTGCTCAATGGTCAGGCCCTCTCTTTCCAAGTCACCGCCAGCGATGGCCGCTGCGTCACGAGCTTCAACGCGGCGCCTGCTGGTTGGCAGTTCGGCCAAACTTTTGAGGGAACTCAATTCTAG 750 54.4 MEDAAFPSLCIKLLVLSLSLGATYGQWESGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYELTCTNDPRSCIPGSIIVTATNFCPPNFALANDHGGWCNPPLPHFDLAEPAFLQIAQYRAGIVPVSYRRVPCLKKGGIRFTINGHSYFLLVLVTNVGGAGDVHSVSIKGSRGGWQAMSRNWGQNWQSNSVLNGQALSFQVTASDGRCVTSFNAAPAGWQFGQTFEGTQF 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1364563 1365483 - Bda026928.1 Bda14g00191 20242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00191 249 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 157 IPR007112 -
Bda14g00191 249 PANTHER EXPANSIN-A15 14 249 IPR002963 GO:0009664
Bda14g00191 249 Pfam Expansin C-terminal domain 158 235 IPR007117 -
Bda14g00191 249 Gene3D - 17 152 IPR036908 -
Bda14g00191 249 Gene3D - 157 249 IPR036749 -
Bda14g00191 249 PRINTS Expansin/Lol pI family signature 194 208 IPR007118 GO:0005576
Bda14g00191 249 PRINTS Expansin/Lol pI family signature 44 62 IPR007118 GO:0005576
Bda14g00191 249 PRINTS Expansin/Lol pI family signature 140 156 IPR007118 GO:0005576
Bda14g00191 249 PRINTS Expansin/Lol pI family signature 232 246 IPR007118 GO:0005576
Bda14g00191 249 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Bda14g00191 249 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Bda14g00191 249 Pfam Lytic transglycolase 62 147 IPR009009 -
Bda14g00191 249 PANTHER EXPANSIN 14 249 - -
Bda14g00191 249 SUPERFAMILY Barwin-like endoglucanases 26 175 IPR036908 -
Bda14g00191 249 PRINTS Expansin signature 132 145 IPR002963 GO:0009664
Bda14g00191 249 PRINTS Expansin signature 84 95 IPR002963 GO:0009664
Bda14g00191 249 PRINTS Expansin signature 57 71 IPR002963 GO:0009664
Bda14g00191 249 PRINTS Expansin signature 203 224 IPR002963 GO:0009664
Bda14g00191 249 PRINTS Expansin signature 156 168 IPR002963 GO:0009664
Bda14g00191 249 PRINTS Expansin signature 232 248 IPR002963 GO:0009664
Bda14g00191 249 PRINTS Expansin signature 96 106 IPR002963 GO:0009664
Bda14g00191 249 PRINTS Expansin signature 115 132 IPR002963 GO:0009664
Bda14g00191 249 PRINTS Expansin signature 168 189 IPR002963 GO:0009664
Bda14g00191 249 SUPERFAMILY PHL pollen allergen 154 246 IPR036749 -
Bda14g00191 249 SMART dpbb_1 62 147 IPR007112 -
Bda14g00191 249 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 167 246 IPR007117 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00191 Bda-Chr14:1364563 Bda05g00964 Bda-Chr5:58134678 1.09E-127 dispersed
Bda14g00191 Bda-Chr14:1364563 Bda14g00205 Bda-Chr14:1429819 1.47E-142 wgd
Bda14g00191 Bda-Chr14:1364563 Bda15g00274 Bda-Chr15:5518006 4.04E-144 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00191 - K20628 egr:104420990 426.787