Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00199 ATGGATCCAGACGCCTTCACCGCCAGCTTATTCAAGTGGGACCCTCGGGCTGCTGTTGGAGGACCATCCACCCGCTTACTGGACCAGGTGACTACCCCACCCACCGGAGCTGCACCTGTCCCCACGACCTTCTCGGTCCGACCGAGGGATCTGGGTGGCCTTGAGGACTTGTTTCAGGCTTACGGCATTAGATACTACACGGCTGCGAAGATAGCGGAGCTTGGGTTCACTGTGAGCACTCTTTTGGACATGAAAGATGGGGAGCTGGATGAGATGATGAACAGCCTCTCGCAGATATTTCGGTGGGACCTCTTGGTGGGAGAAAGGTACGGCATTAAAGCGGCCGTAAGAGCCGAGCGAAGACGATTGGACGATGAAATGGAATCGCGGCGCCGCCACTTACTCTCCGCTGATACTGCTAATAACGCTCTTGATGCACTTTCTCAGGAAGGATTGTCGGAGGAGCATGTGCAGCAGGAGAAGGAGGTGGTGGGGAGTGGAGGAGGAACGAGAGAAGTAATTGTGGCTTCAGAGAGGAAGAAACAGCGGCGTAGGAAGGGGCAGAGAAAAACACTCGTCGATTTCGATAACGACGGAAAGGAAGTGGGAGAAGAAGATGACGACGACATTAATGGTGGAAATGGAATGAACGAGAGACAACGAGAACACCCGTTCATTGTAACAGAACCAGGAGAAGTTGCCAGAGGGAAGAAGAATGGCCTAGATTACCTTTTTCATCTCTACGAACAGTGCCGAGAATTTCTGATGCAGGTGCAGAATATAGCCAAGGACCACGGCGAGAAATGCCCCACCAAGGTGACAAATCAGGTGTTTAGATACGCGAAGAAAGCCGGAGCGAGCTACATCAACAAACCCAAAATGCGACACTACGTGCATTGCTACGCCCTGCACTGTCTGGACGAGGCGGCTTCGAATGCGCTGCGGAGGGCTTTCAAGGAGAGGGGTGAGAACGTGGGAGCTTGGCGACAAGCGTGCTACAAACCTCTGGTGGCTGTAGCCGCTCGCCAAGGGTGGGACATCGACGCGATATTCAACTCTCATCCCCGTTTGGCAATTTGGTATGTCCCCACCAAACTCCGTCAGCTATGTCATTCTGAGCGCAACAGCATTGCAGCTTCGAGCTGTGTCTCCAATGGTCGTGAACTCCCGCCCTTCTGA 1179 53.6 MDPDAFTASLFKWDPRAAVGGPSTRLLDQVTTPPTGAAPVPTTFSVRPRDLGGLEDLFQAYGIRYYTAAKIAELGFTVSTLLDMKDGELDEMMNSLSQIFRWDLLVGERYGIKAAVRAERRRLDDEMESRRRHLLSADTANNALDALSQEGLSEEHVQQEKEVVGSGGGTREVIVASERKKQRRRKGQRKTLVDFDNDGKEVGEEDDDDINGGNGMNERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLMQVQNIAKDHGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEAASNALRRAFKERGENVGAWRQACYKPLVAVAARQGWDIDAIFNSHPRLAIWYVPTKLRQLCHSERNSIAASSCVSNGRELPPF 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1396639 1398219 - Bda026936.1 Bda14g00199 20250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00199 392 PANTHER PROTEIN LEAFY 1 387 IPR002910 GO:0003677|GO:0006355
Bda14g00199 392 MobiDBLite consensus disorder prediction 176 218 - -
Bda14g00199 392 Pfam Floricaula / Leafy protein SAM domain 50 127 IPR035079 -
Bda14g00199 392 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 212 378 IPR035209 GO:0003677
Bda14g00199 392 Gene3D Protein LEAFY 209 378 IPR038276 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00199 Bda-Chr14:1396639 Bda15g00277 Bda-Chr15:5541614 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16996 PF17538 C_LFY_FLO 4.80E-109 CL0123 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00199 - - qsu:112014158 607.831