Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00205 CTCTTCCTCCTCCTCCTCGCTGTTCTCAATCTCTACGTTTGCCGCTCTTCTGCTGATTACGGGGGGTGGGAGAGCGCTCATGCCACATTCTATGGCGGTGGTGATGCATCCGGCACAATGGGAGGTGCATGTGGGTATGGCAATTTATATAGCCAAGGATACGGAACTAATACAGCGGCCCTGAGCACTGCTCTGTTCAACAATGGCTTGAGCTGTGGAGCCTGTTACGAAATAACTTGCCGAGATGACCCACAATGGTGCACTGGGGGTACCATCACCGTCACAGCTACAAATTTCTGCCCTCCAAACAGTGCACTGGCTAATGATAATGGTGGCTGGTGTAATCCTCCGCTTCAGCACTTCGACTTGTCTGAGCCGGTTTTCTTGCATATCGCTCAATATCGGGCCGGCATTGTTCCAGTCTCCTTTAGAAGAGTCCCCTGTACGAAGAAAGGAGGAATTAGGTTCACTGTGAACGGCCACTCTTACTTCAACCTGGTGTTGATCACAAACGTAGGAGGAGCAGGAGATGTTCATTCTGTATCAGTAAAAGGCTCAAAAACTGGCTGGCAGAGCATGTCGAGAAACTGGGGTCAGAATTGGCAGAGCAACTCCTACCTCAGCGGCCAGACTCTGTCCTTTCAAGTGACAACCAGCGACGGCCGGACTCTCACCAGCTACGACGTCTCGCCGGCTAACTGGCAATTCGGGCAAACATTTGAGGGAAGCCAATTT 735 51.56 LFLLLLAVLNLYVCRSSADYGGWESAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEITCRDDPQWCTGGTITVTATNFCPPNSALANDNGGWCNPPLQHFDLSEPVFLHIAQYRAGIVPVSFRRVPCTKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSVKGSKTGWQSMSRNWGQNWQSNSYLSGQTLSFQVTTSDGRTLTSYDVSPANWQFGQTFEGSQF 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1429819 1430712 + Bda033916 Bda14g00205 20256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00205 245 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 163 242 IPR007117 -
Bda14g00205 245 PRINTS Expansin signature 228 244 IPR002963 GO:0009664
Bda14g00205 245 PRINTS Expansin signature 128 141 IPR002963 GO:0009664
Bda14g00205 245 PRINTS Expansin signature 80 91 IPR002963 GO:0009664
Bda14g00205 245 PRINTS Expansin signature 111 128 IPR002963 GO:0009664
Bda14g00205 245 PRINTS Expansin signature 92 102 IPR002963 GO:0009664
Bda14g00205 245 PRINTS Expansin signature 53 67 IPR002963 GO:0009664
Bda14g00205 245 PRINTS Expansin signature 164 185 IPR002963 GO:0009664
Bda14g00205 245 PRINTS Expansin signature 152 164 IPR002963 GO:0009664
Bda14g00205 245 PRINTS Expansin signature 199 220 IPR002963 GO:0009664
Bda14g00205 245 PRINTS Expansin/Lol pI family signature 22 37 IPR007118 GO:0005576
Bda14g00205 245 PRINTS Expansin/Lol pI family signature 190 204 IPR007118 GO:0005576
Bda14g00205 245 PRINTS Expansin/Lol pI family signature 62 80 IPR007118 GO:0005576
Bda14g00205 245 PRINTS Expansin/Lol pI family signature 136 152 IPR007118 GO:0005576
Bda14g00205 245 PRINTS Expansin/Lol pI family signature 40 58 IPR007118 GO:0005576
Bda14g00205 245 PRINTS Expansin/Lol pI family signature 228 242 IPR007118 GO:0005576
Bda14g00205 245 Gene3D - 151 245 IPR036749 -
Bda14g00205 245 PANTHER EXPANSIN-A15 4 245 IPR002963 GO:0009664
Bda14g00205 245 PANTHER EXPANSIN 4 245 - -
Bda14g00205 245 Pfam Expansin C-terminal domain 154 231 IPR007117 -
Bda14g00205 245 SUPERFAMILY PHL pollen allergen 150 242 IPR036749 -
Bda14g00205 245 SMART dpbb_1 58 143 IPR007112 -
Bda14g00205 245 Pfam Lytic transglycolase 58 143 IPR009009 -
Bda14g00205 245 SUPERFAMILY Barwin-like endoglucanases 5 171 IPR036908 -
Bda14g00205 245 Gene3D - 10 149 IPR036908 -
Bda14g00205 245 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 41 153 IPR007112 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda12g00165 Bda-Chr12:1575057 Bda14g00205 Bda-Chr14:1429819 3.02E-130 dispersed
Bda15g00345 Bda-Chr15:6303251 Bda14g00205 Bda-Chr14:1429819 3.23E-128 dispersed
Bda15g00354 Bda-Chr15:6419088 Bda14g00205 Bda-Chr14:1429819 6.53E-129 dispersed
Bda01g01211 Bda-Chr1:47394024 Bda14g00205 Bda-Chr14:1429819 2.37E-80 transposed
Bda07g01328 Bda-Chr7:16055293 Bda14g00205 Bda-Chr14:1429819 4.59E-89 transposed
Bda14g00191 Bda-Chr14:1364563 Bda14g00205 Bda-Chr14:1429819 1.47E-142 wgd
Bda14g00205 Bda-Chr14:1429819 Bda15g00274 Bda-Chr15:5518006 1.49E-158 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00205 - K20628 nnu:104593779 443.351