Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00213 TTATCATACTACAGGGAGAGCTTCGAAGATATAGGAAAGAAAGTAAAGAGAAGTACAGATGCCTCTTCTCAAATCGGAATCAAAAAGCTCATTCCAGGACGTCCTGGAGGCATCAACATCATCACACCATGTGCAGCCTGTAAGCTGTTAAGGCGAAGGTGTGCGCAAGAATGCCCTTTTTCTCCATATTTCTCCCCCCACGAACCCCACAAGTTCGCTTCTGTCCATAAAGTGTTTGGAGCCAGCAATGTCTCAAAGCTACTTATGGAGGTGGATGAGGGCCAAAGAGCAGATGCTGCTAATAGTCTTGTGTACGAAGCCAACGTGAGGCTGAGAGACCCAGTCTACGGCTGCATGGGAGCTATCTTAAATTTGCAGCAGCAAATTCAATCTTTGCAAGCAGAGCTCAACGCAATAAGGGGAGAGATACTGAAATACAATTACGGTGACCCTACTGTTACAGTGCCATCTTCTCAAGTCTCTTTGCTCACTTATTGCGGGCCTGTTTCAGTCATCGTGCCACCCCTTCCACCGCCGCTTCTACCGACCCCAACACCACGGCCGCCATTTTTGTCTTCTGATTCCTCATCTGGCAGCTACCCTCCACCGACCACTGCTGCAAACTACAGCTCCATTACAAGCGATCCAAACGTTACCTACTTTGAGTGA 669 48.28 LSYYRESFEDIGKKVKRSTDASSQIGIKKLIPGRPGGINIITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKLLMEVDEGQRADAANSLVYEANVRLRDPVYGCMGAILNLQQQIQSLQAELNAIRGEILKYNYGDPTVTVPSSQVSLLTYCGPVSVIVPPLPPPLLPTPTPRPPFLSSDSSSGSYPPPTTAANYSSITSDPNVTYFE 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1466564 1467350 + Bda026948.1 Bda14g00213 20264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00213 222 Coils Coil 122 142 - -
Bda14g00213 222 MobiDBLite consensus disorder prediction 183 222 - -
Bda14g00213 222 ProSiteProfiles LOB domain profile. 42 143 IPR004883 -
Bda14g00213 222 MobiDBLite consensus disorder prediction 190 222 - -
Bda14g00213 222 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 19 221 - -
Bda14g00213 222 PANTHER LOB DOMAIN PROTEIN 19 221 - -
Bda14g00213 222 Pfam Lateral organ boundaries (LOB) domain 43 139 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00213 Bda-Chr14:1466564 Bda14g00236 Bda-Chr14:1600223 2.56E-46 dispersed
Bda14g00187 Bda-Chr14:1337488 Bda14g00213 Bda-Chr14:1466564 1.55E-74 wgd
Bda14g00213 Bda-Chr14:1466564 Bda15g00282 Bda-Chr15:5610058 2.49E-45 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16998 PF03195 LOB 2.80E-40 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00213 - - nnu:104597202 274.633