Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00230 ATTCTACACAGGAAGAGAAAGCAAAGACGTAGGCGAGACGGTTCCACAGTCGCGGATACTCTAGCCAAGTGGAAAGTAAATAACGACACTGACTCTTGCAATGATGGGATAAAGAAACCTGGTTATAGAGTTCCAGCAAAAGGATCAAAGAAAGGGTGCATGAAGGGTAAAGGAGGGCCAGAAAATTGGCGTTTCAAATACAGAGGTGTGCGACAGAGGACGTGGGGTAAGTGGGTTGCAGAAATCCGCGAACCCAACAGGGGTAGTAGGCTCTGGTTGGGTACTTATTCTACTGCCATGGAAGCCGCCATTGCTTATGATGCTGCTGCGAGAACCATGTACGGTCCTGGGGCACGTTTGAATTTTCCTGGTGTGACAAGAGGTAGAAATTTGATTGGAACTGTTGACGATGACACTTCTGTGATAACTCAATCAAGCTTGCCTGCAGCAGATTTCGACTCCACTGCAACATCAAATTTGTCCGAGGTTTTTACTGAAGACTCAAAGTCAAAGCTTGTTTCAGATAATTATGAAAATTGGAGATTGAATGATTTGTCGCCTGCTGAGGAGAAAGTGGGAAACTTAGTGAACTCAGAAGCGAAGGACGAAAAGAAGAATCAAAATTTTGACGATTGGGAGAGGATGCTATTGGAAGAAATGTTTGACATGGAGGAAATTCTGAGTCTTATCGAGAATAACCCTCTTGATGACCTGAACTTGTCAGAAGATTTTGGCCATGATTCCTGTAATATAAGGCCATATGACTCATCCTTTCCCTACAATCAAAATACAGAGGCTCTACAGCAGGCTGCGAAGAATTATAATGGTTAA 831 43.56 ILHRKRKQRRRRDGSTVADTLAKWKVNNDTDSCNDGIKKPGYRVPAKGSKKGCMKGKGGPENWRFKYRGVRQRTWGKWVAEIREPNRGSRLWLGTYSTAMEAAIAYDAAARTMYGPGARLNFPGVTRGRNLIGTVDDDTSVITQSSLPAADFDSTATSNLSEVFTEDSKSKLVSDNYENWRLNDLSPAEEKVGNLVNSEAKDEKKNQNFDDWERMLLEEMFDMEEILSLIENNPLDDLNLSEDFGHDSCNIRPYDSSFPYNQNTEALQQAAKNYNG 276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1560956 1561786 + Bda026965.1 Bda14g00230 20281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00230 276 CDD AP2 66 123 IPR001471 GO:0003700|GO:0006355
Bda14g00230 276 Gene3D AP2/ERF domain 66 124 IPR036955 GO:0003700|GO:0006355
Bda14g00230 276 ProSiteProfiles AP2/ERF domain profile. 66 123 IPR001471 GO:0003700|GO:0006355
Bda14g00230 276 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Bda14g00230 276 PRINTS Ethylene responsive element binding protein signature 89 105 IPR001471 GO:0003700|GO:0006355
Bda14g00230 276 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 4 224 - -
Bda14g00230 276 SMART rav1_2 66 129 IPR001471 GO:0003700|GO:0006355
Bda14g00230 276 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 4 224 - -
Bda14g00230 276 Pfam AP2 domain 66 115 IPR001471 GO:0003700|GO:0006355
Bda14g00230 276 SUPERFAMILY DNA-binding domain 66 123 IPR016177 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda14g00230 Bda15g00305 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00230 Bda-Chr14:1560956 Bda05g01056 Bda-Chr5:59056020 3.75E-31 dispersed
Bda14g00230 Bda-Chr14:1560956 Bda15g00305 Bda-Chr15:5872633 4.70E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16999 PF00847 AP2 2.60E-13 CL0081 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00230 - K09286 mnt:21395493 198.364