Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda14g00236 | ATGGGTGGAAATTCACCGTGTGCCTCCTGCAAGCTTTTGAGAAGACGATGTGCAAAGGAATGCATCTTCGCCCCTTATTTTCCCTCTGATGATCCTCATAAGTTTGCCATTGTTCACAAGGTTTTCGGAGCCAGCAACATCAGCAAAATGTTGCAGGAGCTTCCAACTCATCAGCGAGCAGATGCAGTGAGCAGTCTGGTTTATGAAGCTAATGCAAGAATGAGAGACCCAGTCTATGGGTGCGTAGGAGCTATATCTTATCTTCAAAGCCAGGTTTCTCAGCTTCAAATGGAACTTGCCGTGGCTCAGGCGGAGATTCTATGCATCCAAATGCAACAAGAGCCAATGGCTGTGTTGCCAAGTACGTCGCCATTAAACCCAGATGACAAGTCTTATAATTTTCTCCCAAATAATCTCCCCCAGTACCTCAATTTTGCCTGCCTCCACTAA | 450 | 46.22 | MGGNSPCASCKLLRRRCAKECIFAPYFPSDDPHKFAIVHKVFGASNISKMLQELPTHQRADAVSSLVYEANARMRDPVYGCVGAISYLQSQVSQLQMELAVAQAEILCIQMQQEPMAVLPSTSPLNPDDKSYNFLPNNLPQYLNFACLH | 149 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 1600223 | 1600830 | - | Bda026971.1 | Bda14g00236 | 20287 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda14g00236 | 149 | Coils | Coil | 85 | 105 | - | - | |
Bda14g00236 | 149 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 12-LIKE | 1 | 146 | - | - | |
Bda14g00236 | 149 | ProSiteProfiles | LOB domain profile. | 5 | 106 | IPR004883 | - | |
Bda14g00236 | 149 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 1 | 146 | - | - | |
Bda14g00236 | 149 | Pfam | Lateral organ boundaries (LOB) domain | 6 | 103 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g00619 | Bda-Chr7:7551742 | Bda14g00236 | Bda-Chr14:1600223 | 2.44E-48 | dispersed | |
Bda07g00873 | Bda-Chr7:10197152 | Bda14g00236 | Bda-Chr14:1600223 | 1.75E-61 | dispersed | |
Bda14g00213 | Bda-Chr14:1466564 | Bda14g00236 | Bda-Chr14:1600223 | 2.56E-46 | dispersed | |
Bda14g00236 | Bda-Chr14:1600223 | Bda14g00338 | Bda-Chr14:2427324 | 2.45E-48 | dispersed | |
Bda14g00236 | Bda-Chr14:1600223 | Bda15g00282 | Bda-Chr15:5610058 | 7.26E-100 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17000 | PF03195 | LOB | 7.10E-43 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda14g00236 | - | - | qsu:112026683 | 249.21 |