Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00238 ATGGAGAACGTTCCCGCTGTGTCTATTTTTCTGCTATTCTTCTTATCTCTCTTCTCTCGTTCCACCGCTGAAGACCCTTTCGATGTTCGCCAACATCTGGCTACTGTCACCAGATACGGGGCAATTAAAGGTGAAACTGATGCCCTAAACGCAGCTTCCGACATTCCTGATGGCTGTGCTCCTATTCACCTAAATCTTGTGGCTAGGCATGGAACTCGTTCTCCAACAAAGAAGCGGATAAAAGAGTTAAACAATTTGGCAGATCGTTTGGAAGTGATTTTGGGAGTTGCAAAAGAACAGAAGTCATCTCTGCAGAAAGTTCCTGCCTGGTTATGGGGATGGAAATCCCCCTGGAAAGGGAAACTAAATGGGGGAGAACTAGTCAGCAAAGGAGAGGAGGAATTGTATGGTCTTGGAATAAGGACTAGAAGAAAATTTCCAGACTTGTTTCGTGAGGATTATCACCCAGATGTATATACGATAAAAGCAACTCAGGTTCCCCGAGCATCAGCTAGTGCTGTGGCGTTTGGAATGGGACTATTTAGTGAAAAAGGAAACCTAGGACCTGGTCGTCATCGAGCTTTTGCTGTAACAAGTGAAAGTCGGGCAAGTGATATATCACTTAGGTTTTTTGACTCTTGCCAAAATTACAAGGACTTTAGGAAAAGTCAGGAACCTGCAGTTGAGAAGCTCAAGGAACCAATTTTTGACGAAATCACTTCTGCACTAACAAAACGCTATGAGCTGAATTTTACAAGGCAGGATATCGCTTCCCTCTGGTTTCTGTGCAAACAGGAGGCGTCATTATTGGATATAACAGATCAAGCCTGCAGTCTTTTTAACCAGTCTGAGGTTGCTTTGCTGGAGTGGGCCGATGATGTGGAGGGCTTTGTGTTGAAGGGATACGGGAAATCAGTAAATTATCACATGGGAGTACCACTACTTGAAGATGTTGTACAATCCATAGAACAAGCGATTAAGGCTAATGAGGAAAACCAAGCTCCAGGAAGTTACGAAAAGGCAAGACTTCGCTTTGCACATGCCGAAACCGTGGTGCCATTCTCATGTTTGCTTGGGCTTTTTCTTGAAGGGTCAGACTTTCAAAAGATACAAAGGGAAGAACCTTTGCAATATCCCCCAAAGCCTCCTCAGGAGAGAATTTGGAAGGGCAGCAATGTTGCGCCTTTTGCTGGGAATAACATGCTGGTTCTATATTGCTGCCCAGCTAATTCCACAAACAAGTACTTCGTGCAGGTACTGCACAATGAAGTTCCCATGCCACTGCCGGCCTGTGATGGCTCGGATTTCTGCCCGTTTGAAGTTTTCAAGGAAAGAATATTGGCTCCTCATCTGAAGAAGGACTACAATACTGTCTGTGCTGTGAAATTGGAAGCTCCACAGGAGAATCCAGGAACCAGTAAGTTTTTCTTGTTTCGTTGGCTCTCTTGGCTAATTTCGGTTGAAGAATTGACAACGATGGCTTCCCATGCCCCTAATTTGGAGTGCCGAATGTACGAGGCCAGGTATCCAGAGGTTGATATGGCCGTGATGATTCAGGTTAAAAACATTGCGGATATGGGAGCCTATGTCTCTCTCCTCGAGTACAATAACATCGAGGGTATGATTCTTTTCTCCGAGCTGTCTCGCCGTAGGATCCGCAGTGTTAGCAGTCTAATCAAGGTGGGTGACCTATATATCCACATTGGCTGGCCTTTGTACCGGAAATATGGTCATGCTTTCGAGGCCTTCAAGATAATTGTCACTGATCCTGATTCAGTTCTGAACTCACTCACTCGCGAAGTTAAGGAGACTGGTCCTGGTGGGCAGGAGGTGACCAAGGTAATTCCTGCTATTACAGAGGAGGTCAAAGAAGCACTGGTAAAGAATATTAGGAGAAGAATGACTCCCCAACCTCTAAAAGTTCGAGCTGATATTGAGATGAAATGTTTTCAGTTTGACGGCGTCCTTCACATTAAGGAAGCAATGAGGAGGGCTGAAGCTGCTGGCAATGATGATTGTCCTGTTAAAATTAAGCTGGTTGCTCCTCCTCTATATGTTCTTACTACTCAAACTCTTGACAAGGAACAAGGAATAACAGTCCTTAATAAAGCAATCATCGCTTGTACTGAGGCAATAGAAAAACACAAGGGAAAACTTGTGGTGAAGGAAGCACCTAGAGCTGTGAGTGAGCGGGATGATAAGTTACTTGCTGAACACATGGCGAAGCTCCGACAGGACAACGAGGAGATAAGTGGAGATGAAGATAGCGAAGAAGAAGATGACACAGGGATGGGAGAAGTGGATGTGGAAAATGCTGGTCCTGGGATAACGGAGTGA 2337 45.01 MENVPAVSIFLLFFLSLFSRSTAEDPFDVRQHLATVTRYGAIKGETDALNAASDIPDGCAPIHLNLVARHGTRSPTKKRIKELNNLADRLEVILGVAKEQKSSLQKVPAWLWGWKSPWKGKLNGGELVSKGEEELYGLGIRTRRKFPDLFREDYHPDVYTIKATQVPRASASAVAFGMGLFSEKGNLGPGRHRAFAVTSESRASDISLRFFDSCQNYKDFRKSQEPAVEKLKEPIFDEITSALTKRYELNFTRQDIASLWFLCKQEASLLDITDQACSLFNQSEVALLEWADDVEGFVLKGYGKSVNYHMGVPLLEDVVQSIEQAIKANEENQAPGSYEKARLRFAHAETVVPFSCLLGLFLEGSDFQKIQREEPLQYPPKPPQERIWKGSNVAPFAGNNMLVLYCCPANSTNKYFVQVLHNEVPMPLPACDGSDFCPFEVFKERILAPHLKKDYNTVCAVKLEAPQENPGTSKFFLFRWLSWLISVEELTTMASHAPNLECRMYEARYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIKVGDLYIHIGWPLYRKYGHAFEAFKIIVTDPDSVLNSLTREVKETGPGGQEVTKVIPAITEEVKEALVKNIRRRMTPQPLKVRADIEMKCFQFDGVLHIKEAMRRAEAAGNDDCPVKIKLVAPPLYVLTTQTLDKEQGITVLNKAIIACTEAIEKHKGKLVVKEAPRAVSERDDKLLAEHMAKLRQDNEEISGDEDSEEEDDTGMGEVDVENAGPGITE 778
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1606620 1617597 + Bda026973.1 Bda14g00238 20289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00238 778 SUPERFAMILY Nucleic acid-binding proteins 504 564 IPR012340 -
Bda14g00238 778 Pfam Histidine phosphatase superfamily (branch 2) 63 422 IPR000560 -
Bda14g00238 778 CDD HP_HAP_like 125 422 IPR000560 -
Bda14g00238 778 Gene3D - 498 567 IPR012340 -
Bda14g00238 778 MobiDBLite consensus disorder prediction 740 778 - -
Bda14g00238 778 ProSiteProfiles S1 domain profile. 513 563 IPR003029 GO:0003676
Bda14g00238 778 PANTHER MULTIPLE INOSITOL POLYPHOSPHATE PHOSPHATASE 1-LIKE 16 488 - -
Bda14g00238 778 PANTHER MULTIPLE INOSITOL POLYPHOSPHATE PHOSPHATASE-RELATED 16 488 - -
Bda14g00238 778 Gene3D EIF_2_alpha 639 761 IPR024055 -
Bda14g00238 778 Coils Coil 80 100 - -
Bda14g00238 778 Gene3D - 27 453 IPR029033 -
Bda14g00238 778 SUPERFAMILY eIF-2-alpha, C-terminal domain 637 753 IPR024055 -
Bda14g00238 778 Coils Coil 740 760 - -
Bda14g00238 778 SUPERFAMILY Phosphoglycerate mutase-like 22 467 IPR029033 -
Bda14g00238 778 Pfam S1 RNA binding domain 510 563 IPR003029 GO:0003676
Bda14g00238 778 MobiDBLite consensus disorder prediction 750 766 - -
Bda14g00238 778 SUPERFAMILY eIF2alpha middle domain-like 560 637 IPR024054 -
Bda14g00238 778 Pfam Eukaryotic translation initiation factor 2 alpha subunit 564 694 IPR011488 GO:0003723|GO:0003743
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda15g00261 Bda-Chr15:5219924 Bda14g00238 Bda-Chr14:1606620 0 transposed
Bda14g00238 Bda-Chr14:1606620 Bda15g00260 Bda-Chr15:5216055 7.77E-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00238 K03103 - vvi:100253622 735.332