Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00243 ATGTCCCGTGCAGTTGCGGCACCAAACTCTTCTCTGTTTTCACCTTCCAAGATTTCTTCTTCTTTTTTGTACGACTCTTCCTCCGCTTCTTCTAATTCTCCGGGGAACAACGTCTATGAATCATCGCCATCTGGATCGGTGTCGACGTCTTCGCCCTTTCCGATGCCACTGCGGCGAACGAAGCAGATGAAAGACGGCCTGAGTACTATTCTTTCCAGGAAGAGGCCGGCGAGGATAGCGGTACCGGTTGTTTCTGTGGATTTCGGAGGCGATGATGATCTTATTGACGAGAGATTCGACCTGGTAGAGGTGGAAGAGAAAGGGTACTCCGTTTATTGTAAGAAGGGAGGATCAAGAACTACAATGGAGGATCGATACTCCGCTGTAGTTAATAGGCGGGAGGATTCTGGACAGGCTTCCTTCTTTGGTGTTTTTGACGGCCACGGGGGAACAAAAGCTGCAGAATTTGCTGCAAAGGAAATAGGCAAGAACATCCTATCTCGAGCAGCTAGAAAAAGCGAAAAGGATCTCGAGCAAGCAATTAAAGAATGCTACTTAATTACAGACAAACAGTTCTCGGAAGAGGGTGGGAGCGGCGGTACTTGTTGCGTAACTGCACTGATACGAGACGGCGATCTGGCAGTCTCCAACGCTGGCGACTGTCGTGCCGTTTTGAGTAGAAAAGGAATAGCAGAGGCCCTCAGTTCCGATCACCGGCCATCGAGGGACGACGAAAGAAAGAGAATTGAAAACCTGGGCGGTTATGTAGATTGCCGGAATGGAGTCTGGAGAGTGCAAGGATCACTCGCAGTGTCGAGAGGGATCGGCGATAGTCACCTCAAGCAGTGGGTCATATCAGAGCCGGAGACGACAGTCATCGAGATCAGCCATGATTGCGAGTTCTTAATCCTCGCTTCTGATGGTCTTTGGGACAAGGTTAATGACGAGGAAGCAGTAAACCTAGTCCGTCCTCTATGCGTGGGTCTTGAAGAGCCGAAACTACTCTCTGCTTGCAAGAAGATAGCTGCGTTATCAATGGCGAGAGGCTCAGCTGACGATATTAGCGTGATGATCATTAAATTGAGTAGCTTCGTTTAG 1098 49.36 MSRAVAAPNSSLFSPSKISSSFLYDSSSASSNSPGNNVYESSPSGSVSTSSPFPMPLRRTKQMKDGLSTILSRKRPARIAVPVVSVDFGGDDDLIDERFDLVEVEEKGYSVYCKKGGSRTTMEDRYSAVVNRREDSGQASFFGVFDGHGGTKAAEFAAKEIGKNILSRAARKSEKDLEQAIKECYLITDKQFSEEGGSGGTCCVTALIRDGDLAVSNAGDCRAVLSRKGIAEALSSDHRPSRDDERKRIENLGGYVDCRNGVWRVQGSLAVSRGIGDSHLKQWVISEPETTVIEISHDCEFLILASDGLWDKVNDEEAVNLVRPLCVGLEEPKLLSACKKIAALSMARGSADDISVMIIKLSSFV 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1703696 1705107 - Bda026979.1 Bda14g00243 20294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00243 365 Gene3D - 110 364 IPR036457 -
Bda14g00243 365 Pfam Protein phosphatase 2C 113 354 IPR001932 -
Bda14g00243 365 CDD PP2Cc 112 361 IPR001932 -
Bda14g00243 365 PANTHER PROTEIN PHOSPHATASE 2C 3 364 IPR015655 GO:0004722|GO:0006470
Bda14g00243 365 Coils Coil 163 183 - -
Bda14g00243 365 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED 3 364 - -
Bda14g00243 365 MobiDBLite consensus disorder prediction 1 56 - -
Bda14g00243 365 ProSitePatterns PPM-type phosphatase domain signature. 141 149 IPR000222 GO:0043169
Bda14g00243 365 MobiDBLite consensus disorder prediction 1 59 - -
Bda14g00243 365 SMART PP2C_4 101 359 IPR001932 -
Bda14g00243 365 SMART PP2C_SIG_2 125 361 IPR001932 -
Bda14g00243 365 SUPERFAMILY PP2C-like 108 362 IPR036457 -
Bda14g00243 365 ProSiteProfiles PPM-type phosphatase domain profile. 108 361 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02205 Bda-Chr1:57925610 Bda14g00243 Bda-Chr14:1703696 4.82E-71 dispersed
Bda14g00243 Bda-Chr14:1703696 Bda03g00114 Bda-Chr3:1021779 3.64E-56 dispersed
Bda14g00243 Bda-Chr14:1703696 Bda13g01574 Bda-Chr13:39243086 6.40E-90 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00243 K17506 - csin:114291970 390.963