Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00247 ATGTGTAGAGATTCCAAGAACAAACTTGATTCTTTGAGTTTGATCATGGAAGGCAAGTTTCAGAAGTATGTTTCCTCCGAATGCTCTCTTTTGCTTGAATTAGCGGCCTCAGATGATGTGGAATCCTTCAGAAAAGAAGTAGAAGAAAGGGGTTTCAATGTTGACGAACCAAGCTTTTGGTACGGAAGAGTGATTGGACCAAAAAGAATGGGACTGGAGGAGCGGACTCCGCTTATGATTGCGGCCATGTTTGGAAACGCTAAGGTTGTGAATTACATAATCGAAACTGGAAAAGCTGATGTTAATCGAGCTTGTGGTTCCGATGGAGTCACTGCTCTTCACTGTGCTATATCTGGCGGCTCAGTTTCTTCTGTGGACACCGTTAAACTCTTACTCAGTGCATCTTCCGATGTTGATCGACTCAACGCCTACGGACTGAAACCAATCGATTTAATCTGCATGGATCTTAAATCGCCAATAAATTCAAGAAGGAAGGCGTTGGAGATGTTGCTGAAAGGTGATGGTATTGGTTTGGAAGAAGGTGAATTGAGCCTCAAACTAGAAGCAGACAAGCTGAAGATAGCAATGCCCCAATTATCGAAAGGATTTGAGAAGAAAGAATTTCCGATTGACATATCGTTGCCAGATATAAACTTTGGACTATATGGTACTGATGATTTTAGGATGTATACTTTCAAGGTGAAGCCTTGTTCAAGGGCATACTCTCATGATTGGACAGAGTGCCCTTTTGTTCATCCTGGTGAAAACGCTCGCCGGAGAGATCCCCGTAAGTATCCGTATAGCTGTGTTCCCTGCCCGGATTTTCGTAAAGGAAATTGTGAGAAAGGTGATTCATGTGAATATGCACATGGCGTGTTTGAATCATGGCTTCACCCTGCTCAATATCGAACCCGTCTTTGCAAGGATGAGACTGGATGTGCAAGGAAGGTCTGCTTTTTTGCTCACAAACCTGAAGAATTACGACCTGTGTATGCCTCTACCGGCTCGGCCATGCCCTCTCACCGGCCTCTTTCAGCCAGTGCAATCGATATGGCCATGCTGAGCCCATCGAATCTTGGTGCTTCATCTTTGCCATTGCCTGCCACTTCGACACCACCATTGTCGCCATTGGCAGCCGCTTCGTCACCCAAAAATGGGATTTTGTGGCAGAACAAATTTAATCTCACGCCTCCTGTTCTTCAGCTTCCTGGCAGTCGCTTGAAAACGGCTACGAGTGCTCGAGATCTTACTTTAGAGATGGAATTGCTCGGGATTAAAACACCTTCCAGCCAACAACAGAATCAGCAGTTAATTGATGAGATATCTCGGCTTTCCTCTCCTACATATTGGAGTAAAGATCGCGGCAGAATTGGAGATCTGAAACCAACCAACCTCGATGATGTATATGGTTCGTTAGAATCATCCTTGTTGTCTCAATTTGAGGGCCTTCCACTGAATCCGTTGTCCCCTTCTCCATTACACTCTTCCACGGGGCTTCATATGCATCAAAATTTGAACCAACTTCGTTCAAATTACCCAACCAATCTCGCATCTCCATCAATGAGGAAGCCGGCATCTTTTGGCCTTGACTCAGGTTCATCGGCAGCAGTTATGAGTTCTAGGTCCGCTGCTTTTGCTAAGCGTAGTCAGAGTTTCATTGATCGATCAGCCATCACTCATCTTCCTGACTTTTCGGGTGCTTCTATTTCTGCGGCTAATGTATCTTCCAATCTTTCTGGTTGGGGTTCACCTGATGGAAAGTTGAATTGGGCTGTTAAAGGAGATGAACTCAACAAGTTGAAGAAGTCTGCCTCTTTTGGGATGAGAAACTCTACTGCAGGAATAACCAATGCCGCCTTGACCACTGCCTCGGCTTATGAGCCTGATGTCTCGTGGGTTAATACTTTGGTGAAAGATGTACCTCCTGAGAACCGGCAATTCAACCTCGATGAAGGGATTAACGAGGCACTACTTTCTTGGGCGGATCAGCTGTACATAGAGCAGGAGCAAGTAGTGGCATAA 2022 45.35 MCRDSKNKLDSLSLIMEGKFQKYVSSECSLLLELAASDDVESFRKEVEERGFNVDEPSFWYGRVIGPKRMGLEERTPLMIAAMFGNAKVVNYIIETGKADVNRACGSDGVTALHCAISGGSVSSVDTVKLLLSASSDVDRLNAYGLKPIDLICMDLKSPINSRRKALEMLLKGDGIGLEEGELSLKLEADKLKIAMPQLSKGFEKKEFPIDISLPDINFGLYGTDDFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYSCVPCPDFRKGNCEKGDSCEYAHGVFESWLHPAQYRTRLCKDETGCARKVCFFAHKPEELRPVYASTGSAMPSHRPLSASAIDMAMLSPSNLGASSLPLPATSTPPLSPLAAASSPKNGILWQNKFNLTPPVLQLPGSRLKTATSARDLTLEMELLGIKTPSSQQQNQQLIDEISRLSSPTYWSKDRGRIGDLKPTNLDDVYGSLESSLLSQFEGLPLNPLSPSPLHSSTGLHMHQNLNQLRSNYPTNLASPSMRKPASFGLDSGSSAAVMSSRSAAFAKRSQSFIDRSAITHLPDFSGASISAANVSSNLSGWGSPDGKLNWAVKGDELNKLKKSASFGMRNSTAGITNAALTTASAYEPDVSWVNTLVKDVPPENRQFNLDEGINEALLSWADQLYIEQEQVVA 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1738302 1740323 - Bda026983.1 Bda14g00247 20298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00247 673 ProSiteProfiles Ankyrin repeat region circular profile. 108 139 - -
Bda14g00247 673 SUPERFAMILY Ankyrin repeat 30 151 IPR036770 -
Bda14g00247 673 ProSiteProfiles Zinc finger C3H1-type profile. 266 293 IPR000571 GO:0046872
Bda14g00247 673 Gene3D - 267 329 - -
Bda14g00247 673 ProSiteProfiles Ankyrin repeat region circular profile. 73 97 - -
Bda14g00247 673 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29 19 671 - -
Bda14g00247 673 SMART ANK_2a 108 140 IPR002110 GO:0005515
Bda14g00247 673 SMART ANK_2a 73 103 IPR002110 GO:0005515
Bda14g00247 673 ProSiteProfiles Ankyrin repeat profile. 73 97 IPR002110 GO:0005515
Bda14g00247 673 PANTHER UNKEMPT FAMILY MEMBER 19 671 IPR045234 -
Bda14g00247 673 Gene3D - 19 173 IPR036770 -
Bda14g00247 673 SMART c3hfinal6 266 292 IPR000571 GO:0046872
Bda14g00247 673 SMART c3hfinal6 301 324 IPR000571 GO:0046872
Bda14g00247 673 Pfam Ankyrin repeats (3 copies) 68 139 IPR002110 GO:0005515
Bda14g00247 673 ProSiteProfiles Ankyrin repeat profile. 108 143 IPR002110 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01538 Bda-Chr9:47033603 Bda14g00247 Bda-Chr14:1738302 2.72E-50 dispersed
Bda11g00674 Bda-Chr11:6761347 Bda14g00247 Bda-Chr14:1738302 5.87E-147 dispersed
Bda14g00247 Bda-Chr14:1738302 Bda01g00607 Bda-Chr1:33068489 1.02E-52 dispersed
Bda14g00175 Bda-Chr14:1218809 Bda14g00247 Bda-Chr14:1738302 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17002 PF12796 Ank_2 3.50E-09 CL0465 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00247 - - zju:107404189 855.129