Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda14g00249 | ATGGCTTCCATCTCTACCAGTCCTCGCACTGTTGAAGATATTTTCAAGGATTACAGTGCTCGACATTCCGGCCTCGTTCGCGCTCTCACCTACGGTAATCTCTCTCTCTCTGTCTCACTCTGCTTCTTCTTAGAAAATTTGTGCTTGTATGGACACCCAAACGAGGCATGGGAGGTGACTCTCCCTGCTGAGGAAGTTCCTCCAGAGCTTCCTGAACCAGCGTTGGGCATTAATTTTGCAAGAGACGGGATGAAGCGAAAGGACTGGCTTTCATTAGTGGCTGTCCACAGCGATTGTTGGTTGCTCTCAGTTGCTTTCTACTTTGGCGCTCGATTGAACCGCAATGAAAGGAAGCGCCTGTTTAGTCTGATCAACGACCTGCCTACTGTTTTTGAAGTTGTAACTGGGAGGAAGCCTTTGAAAGAAAGACTCAGTATGGATAGTGGAAGCAAATCCAGGAACACCACAAAGAGATCAATTGAAGGACAGGCAAGAAGCAGCAATTCTAAGATAATCGACGAAAATTACGGAGACAAAGAAGACCAGCACAGCCATGTTCTTTGCGGAAGCTGTGGTGGCAATTATAGCGGAGACGATTTTTGGATCGGGTGCGACATATGCGAGAGGTGGTTTCACGGAAAATGTGTGAAGATAACACCAGCCAAGGCCGAAAATATTAAACAGTACAAATGTCCCTCGTGCAGCACAAAGAAGGGGGGACAG | 723 | 47.3 | MASISTSPRTVEDIFKDYSARHSGLVRALTYGNLSLSVSLCFFLENLCLYGHPNEAWEVTLPAEEVPPELPEPALGINFARDGMKRKDWLSLVAVHSDCWLLSVAFYFGARLNRNERKRLFSLINDLPTVFEVVTGRKPLKERLSMDSGSKSRNTTKRSIEGQARSSNSKIIDENYGDKEDQHSHVLCGSCGGNYSGDDFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSTKKGGQ | 241 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 1747643 | 1754170 | - | Bda033921 | Bda14g00249 | 20300 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda14g00249 | 241 | SUPERFAMILY | FYVE/PHD zinc finger | 175 | 238 | IPR011011 | - | |
Bda14g00249 | 241 | Pfam | Alfin | 10 | 136 | IPR021998 | GO:0006355|GO:0042393 | |
Bda14g00249 | 241 | Pfam | PHD-finger | 188 | 236 | IPR019787 | - | |
Bda14g00249 | 241 | SMART | PHD_3 | 187 | 235 | IPR001965 | - | |
Bda14g00249 | 241 | PANTHER | PHD FINGER PROTEIN ALFIN-LIKE 2 | 1 | 239 | - | - | |
Bda14g00249 | 241 | MobiDBLite | consensus disorder prediction | 144 | 164 | - | - | |
Bda14g00249 | 241 | CDD | PHD_AL_plant | 187 | 237 | IPR044104 | - | |
Bda14g00249 | 241 | ProSiteProfiles | Zinc finger PHD-type profile. | 185 | 237 | IPR019787 | - | |
Bda14g00249 | 241 | MobiDBLite | consensus disorder prediction | 149 | 164 | - | - | |
Bda14g00249 | 241 | ProSitePatterns | Zinc finger PHD-type signature. | 188 | 234 | IPR019786 | - | |
Bda14g00249 | 241 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 185 | 236 | IPR013083 | - | |
Bda14g00249 | 241 | PANTHER | CPG BINDING PROTEIN | 1 | 239 | IPR045104 | GO:0006355|GO:0042393 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda14g00569 | Bda-Chr14:4339225 | Bda14g00249 | Bda-Chr14:1747643 | 2.84E-06 | dispersed | |
Bda14g00249 | Bda-Chr14:1747643 | Bda15g00255 | Bda-Chr15:5144962 | 1.95E-144 | wgd | |
Bda14g00249 | Bda-Chr14:1747643 | Bda03g00819 | Bda-Chr3:6954682 | 1.87E-110 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17003 | PF12165 | Alfin | 1.50E-57 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda14g00249 | - | - | rcu:8261734 | 402.519 |