Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00262 ATGGCAACTACTTATCGAGATCGGACGACGGAGTTTCTATCTTTATCTGAGACGCTGAAGAAGATCGGACCAATCAAAACAGTTAGTCAAGCTGAAAACGAGACCTCTCTTTCTAAACCTTCCCGACCTGTCTCTTCCAAGTCAGAATTCAATAGGAAGGCTGCGCAAATTTCTTTCGGAATGCATGAGACCTCTCATAAGATTGCTCGACTTGCGCAATTGGCAAAAAGATCATCAATGTTTGATGACCCAATTGTGGAAATACAGGAATTGACCGTTTTCATAAAGAACGATATAACAGCTTTGAATGTAGCTCTCTCTGATCTACAAACTATTCAAAACATGGAAATGGCCGATGGGAGCTATTCTGAGGATAAAGTTGTTCACTCAACAGCTGTTTGTGATGACTTGAAAAACAGACTCATGGGGGTCACTAAACATCTTAAAAATGTGTTAACCACAAGAACAGAGAACATAAAAGCAAATGAGAGTAGGAAGCAGATATTCTCCGCAACTGTAACTAAAGAAAATGCTTCTCAAAATCATGCAAAGACAGTGTCTCAGCCACCACCGTGGTTAATTTCATCAAATACATCTGAGAGTTCTCAACCACCAACATTGCCAGTAAATGGAGGCCAAGTTGGTAGTCAACTGAGGAGAAGGTTAGCTGTCGAAAACACTCCATCCCAGCATATGGAAATGTCAATGTTACAGCAGGTGGTTCCAAGACAGGAAAATTATTCTGAAAGTCGTGGGGTTGCTCTTCATAATGTTGAATCTACGATTTCAGAACTCAGTGGAATCTTTACGCATTTGGCGACGATGGTTGCTCATCAAGGGGAACTGGCTATCAGGATTGACGATAACATGGATGAATCGTTGACTAATGTCGAAGGGGCTCGCAGCTCTCTATTAAGGCATCTCAACCGAATATGGTCAAATAGGTGGCTTATGATCAAAATATTTGGGATAATTATATTTTTTCTAATGGTCTTTATTTTTTTCATGGCTTGA 1014 40.43 MATTYRDRTTEFLSLSETLKKIGPIKTVSQAENETSLSKPSRPVSSKSEFNRKAAQISFGMHETSHKIARLAQLAKRSSMFDDPIVEIQELTVFIKNDITALNVALSDLQTIQNMEMADGSYSEDKVVHSTAVCDDLKNRLMGVTKHLKNVLTTRTENIKANESRKQIFSATVTKENASQNHAKTVSQPPPWLISSNTSESSQPPTLPVNGGQVGSQLRRRLAVENTPSQHMEMSMLQQVVPRQENYSESRGVALHNVESTISELSGIFTHLATMVAHQGELAIRIDDNMDESLTNVEGARSSLLRHLNRIWSNRWLMIKIFGIIIFFLMVFIFFMA 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1802621 1805093 - Bda026998.1 Bda14g00262 20313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00262 337 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 245 307 IPR000727 -
Bda14g00262 337 PANTHER SYNTAXIN 4 336 IPR045242 -
Bda14g00262 337 ProSitePatterns Syntaxin / epimorphin family signature. 251 290 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bda14g00262 337 MobiDBLite consensus disorder prediction 175 215 - -
Bda14g00262 337 SMART tSNARE_6 240 307 IPR000727 -
Bda14g00262 337 Pfam SNARE domain 282 333 IPR000727 -
Bda14g00262 337 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 3 21 IPR021538 -
Bda14g00262 337 CDD SNARE_syntaxin5 248 336 - -
Bda14g00262 337 MobiDBLite consensus disorder prediction 175 213 - -
Bda14g00262 337 Gene3D - 45 300 - -
Bda14g00262 337 SUPERFAMILY t-snare proteins 48 300 IPR010989 GO:0016020|GO:0016192
Bda14g00262 337 PANTHER SYNTAXIN-31 4 336 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00978 Bda-Chr1:43390432 Bda14g00262 Bda-Chr14:1802621 6.65E-101 dispersed
Bda14g00262 Bda-Chr14:1802621 Bda13g01286 Bda-Chr13:35174025 1.53E-49 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00262 K08490 - jre:108991917 473.396