Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00265 ATGGCGCCAAGCGAAAGCACAGTTTTGCAATTTACCCCTTCTTCGACCAGCTTGTCAGCGAAGGTTCATCCTTTGGTTATTTTCAACATCTGTGACTGTTACGTTCGACGCCCTGACCAAGCTGAGCGGGTAATCGGAACTCTTCTTGGATCTGTTTTACCCGACGGTACCGTCGATATCCGAAATTCGTATGCCGTTCCTCACAACGAGTTCTCCGATCAGGTTGCCTTGGATATCGATTATCACCATAATATGTTAATTTCTCACCAAAAAGTGAACCCAAAGGAAGCCATTGTTGGATGGTACTCAACTGGCCTGGGAGTTACTGCTGGCAGTTCTTTGATTCATGATTTCTATTCAAGAGAAGTTCCCAACCCTATTCATTTGACTGTTGACACCGGCTTCAGGAATGGCGAGGGTACCATCAAAGCTTATGTCTCGGTCAATTTGTCTTTGGGAGACAGACAGCTTGCCGCCCAATTTCAAGAAATTCCTCTAGATCATCGTATGGTTGAAGCTGAGCGAGTTGGATATGATATTCTTAAGTCGACAATGGTTGAAAAACTACCCAATGATTTGGAAGGAATGGAAGCCTCAATGGAACGTCTACTATGTCTAATTGATGATGTCTACAAATACGTGGACAATGTTGTGGAAGGTCATGTTGCACCCGACAACAGCATAGGAAGATTTATAGCGGATACAGTTGCATCCCTGCCAAAAATGTCGCCATCATCTTTTGATAAACTAATGAATGATAACCTCCAGGATCATTTGGTGTTGCTATATTTGTCAAGTATCACCAGGACACAGCTGAGCTTGGCTGAAAAGTTGAATACAGCAGCTCAGAACCTGTAA 858 43.71 MAPSESTVLQFTPSSTSLSAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYAVPHNEFSDQVALDIDYHHNMLISHQKVNPKEAIVGWYSTGLGVTAGSSLIHDFYSREVPNPIHLTVDTGFRNGEGTIKAYVSVNLSLGDRQLAAQFQEIPLDHRMVEAERVGYDILKSTMVEKLPNDLEGMEASMERLLCLIDDVYKYVDNVVEGHVAPDNSIGRFIADTVASLPKMSPSSFDKLMNDNLQDHLVLLYLSSITRTQLSLAEKLNTAAQNL 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1816518 1818781 + Bda027001.1 Bda14g00265 20316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00265 285 Pfam Maintenance of mitochondrial structure and function 172 278 IPR024969 -
Bda14g00265 285 CDD MPN_eIF3f 21 278 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bda14g00265 285 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 18 121 IPR000555 GO:0005515|GO:0008233|GO:0008237
Bda14g00265 285 ProSiteProfiles MPN domain profile. 20 151 IPR037518 -
Bda14g00265 285 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 9 285 - -
Bda14g00265 285 Gene3D Cytidine Deaminase, domain 2 8 186 - -
Bda14g00265 285 Hamap Eukaryotic translation initiation factor 3 subunit F [EIF3F]. 18 281 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bda14g00265 285 SMART pad1_6 19 150 IPR000555 GO:0005515|GO:0008233|GO:0008237
Bda14g00265 285 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F 9 285 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00265 Bda-Chr14:1816518 Bda03g01396 Bda-Chr3:50685274 2.09E-31 wgd
Bda14g00265 Bda-Chr14:1816518 Bda05g00934 Bda-Chr5:57911411 7.50E-31 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00265 K03249 - csv:101205957 506.523