Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00285 ATGGCGAATCGATGGTGGGCGGGTAACGTAGCCATGAGAGGCGTGAACCCAATTTCTTCATCTCCTTCATTTCAGATGAGAAACGCCGAAGAAGAGAGTGGAGGACTGAACAGGTTTGCACCGAGGAGAGAGCAAGAGCTATTCATGGATTCTCACACCAACTCAACCCCTACGAACAGTAGCACGAGCAACCCCAACTCCACGCCTCGTAAACAAAGCCTCGAGGACGAAGTTAGCAGGGAAAATTATCGGGAAACTGAAGATCCAATCTCGGGCGGCGTTGAGATCGTCGAACTAGGTAGTACCAGTGGCAATCGCCGGCCTCGCGGGCGACCACCAGGGTCCAAAAACAAGCCAAAACCACCAATCGTTGTCACTAAAGAAAGCCCAAATGCTCTCCGAAGCCACGTCTTGGAAATCAGCACGGGCAGTGACATAGTCGAGAGCATCTCCACCTTCGCCCAACGCCGCCACCGAGGAGTCTCCGTTCTAAGCGGCAGTGGCATTGTCACAAACGTCTCTTTCCGACAACCTGCTGCACCAAACGGAGTCATCACTCTCACTGGCAGATTTGAGATTTTATCTCTATCTGGTGCGTTTTTACCTGCCCCGGCTCCTCCTGGAGCCACTGGACTGACGGTGTATTTAGCCGGAGGGCAAGGTCAGGTGGTCGGTGGAATAGTGGTGGGTTCGCTCATGGCTTCTGGTCCAGTTATGGTGATCGCAGCCACGTTTACTAATGCCACTTATGAGCGATTGCCAATCGAAGATGAGCAGCCAAATGATGATCAGGCAGCCCAATTAGAGTCGCAATCAGTGTCTCAAAGCATGGGCGATCAACCTCCAATGCCCGCCTACAATATGCCGCCTCATTTGATACTAAATGGGCAGATGCCTTCTGATGTTTTCTGGGTTTCTCCTCCTCGCCCCCCTCCCTCTTACTGA 945 52.59 MANRWWAGNVAMRGVNPISSSPSFQMRNAEEESGGLNRFAPRREQELFMDSHTNSTPTNSSTSNPNSTPRKQSLEDEVSRENYRETEDPISGGVEIVELGSTSGNRRPRGRPPGSKNKPKPPIVVTKESPNALRSHVLEISTGSDIVESISTFAQRRHRGVSVLSGSGIVTNVSFRQPAAPNGVITLTGRFEILSLSGAFLPAPAPPGATGLTVYLAGGQGQVVGGIVVGSLMASGPVMVIAATFTNATYERLPIEDEQPNDDQAAQLESQSVSQSMGDQPPMPAYNMPPHLILNGQMPSDVFWVSPPRPPPSY 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1937780 1938724 + Bda027023.1 Bda14g00285 20336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00285 314 ProSiteProfiles PPC domain profile profile. 130 271 IPR005175 -
Bda14g00285 314 SUPERFAMILY AF0104/ALDC/Ptd012-like 130 258 - -
Bda14g00285 314 MobiDBLite consensus disorder prediction 50 72 - -
Bda14g00285 314 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 9 314 - -
Bda14g00285 314 Gene3D - 133 263 - -
Bda14g00285 314 MobiDBLite consensus disorder prediction 73 88 - -
Bda14g00285 314 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 9 314 IPR014476 GO:0003680
Bda14g00285 314 MobiDBLite consensus disorder prediction 264 281 - -
Bda14g00285 314 MobiDBLite consensus disorder prediction 14 30 - -
Bda14g00285 314 Pfam Plants and Prokaryotes Conserved (PCC) domain 134 247 IPR005175 -
Bda14g00285 314 MobiDBLite consensus disorder prediction 13 125 - -
Bda14g00285 314 CDD DUF296 134 217 IPR005175 -
Bda14g00285 314 MobiDBLite consensus disorder prediction 260 293 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00285 Bda-Chr14:1937780 Bda07g00512 Bda-Chr7:6538506 3.57E-70 dispersed
Bda14g00144 Bda-Chr14:991209 Bda14g00285 Bda-Chr14:1937780 3.47E-126 wgd
Bda14g00285 Bda-Chr14:1937780 Bda15g00342 Bda-Chr15:6271137 1.24E-118 wgd
Bda14g00285 Bda-Chr14:1937780 Bda15g00235 Bda-Chr15:5005579 1.11E-33 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00285 - - qsu:112039774 374.4