Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda14g00300 | ATGGTTTTCTCATCAATACCAGTCTATTTGGATCCACCAAACTGGCAACAGCAAACAAATCATCAATCTGGAGTTGGCTGTGAAAACACTCCAACGCCACATTTACCACCACCTTTACCTGTTGCTGGAGGTGGATCCGGTTCGATCAGGCCGAGTTCGTTGGCTGATCGTGCCCGTCTAGCCAAGATGCCACAGCCGGAGGTTGCCCTAAAGTGCCCAAGATGCGAATCCACAAACACGAAGTTTTGTTACTACAATAATTACAACTCTTCTCAACCTCGCCATTTTTGTAAGAACTGCAGGCGATATTGGACGAGAGGAGGTGCCCTGAGGAACGTCCCGGTTGGGGGTGGTAGCAGAAGGAACAAAAGAAGTAAAGCCGGAAATGGATCGAAATCTCCATTGATGGAGAAGAAAACTGCGTCAAGCTCTACTGCTACAGTTTCTTCAAGTAGCTGCACTTCTGATATGGTTGGCCATTTGATCCGTCCAGAATCTTCGCAGCTGCAACTTTTTCCATATCATCATCTGAGTGATTATAGTATCGGGAATGTGGGCATGAGTTTCGCCGGAATCCAACCACCTACTGTTGGCGAAGATAGTGTTAGATTTCCGATCGCTACAGATTCAAGTGGTTGCCCGGGCGGCAGTGGTGATCCCATGTTTTCCTGTGCAATTACTGAAAATTGGAGATTACAACAAGTTCAGCAATTTCCATTTCTATCAAATATGGAAAATTCAAATGGGTTATATGCGTTGGGGTGTTATAATGAAGGTGGCGCAGAGCGACCCAATTATCAGCTTCATCGCTTTTCGAAGCCCTTAGCTTCTGGGGTTTCACGTTTGGTAACAGAGAAAATGGAGGAAAATCAAGGGTTTAATTTTCCGAGAAACTTTCTGGGTGTTCAAGGAAATGATCAATTCTGGGGAGGAAACAATGCCTGGAATGACCTTTCTGGTTTCAGTTCGTCATCCACCAGCCACCTCTAA | 990 | 45.66 | MVFSSIPVYLDPPNWQQQTNHQSGVGCENTPTPHLPPPLPVAGGGSGSIRPSSLADRARLAKMPQPEVALKCPRCESTNTKFCYYNNYNSSQPRHFCKNCRRYWTRGGALRNVPVGGGSRRNKRSKAGNGSKSPLMEKKTASSSTATVSSSSCTSDMVGHLIRPESSQLQLFPYHHLSDYSIGNVGMSFAGIQPPTVGEDSVRFPIATDSSGCPGGSGDPMFSCAITENWRLQQVQQFPFLSNMENSNGLYALGCYNEGGAERPNYQLHRFSKPLASGVSRLVTEKMEENQGFNFPRNFLGVQGNDQFWGGNNAWNDLSGFSSSSTSHL | 329 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 2027799 | 2028913 | - | Bda027035.1 | Bda14g00300 | 20351 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda14g00300 | 329 | MobiDBLite | consensus disorder prediction | 111 | 152 | - | - | |
Bda14g00300 | 329 | PANTHER | DOF ZINC FINGER PROTEIN DOF3.6 | 4 | 326 | - | - | |
Bda14g00300 | 329 | MobiDBLite | consensus disorder prediction | 135 | 152 | - | - | |
Bda14g00300 | 329 | Pfam | Dof domain, zinc finger | 69 | 124 | IPR003851 | GO:0003677|GO:0006355 | |
Bda14g00300 | 329 | ProSiteProfiles | Zinc finger Dof-type profile. | 70 | 124 | IPR003851 | GO:0003677|GO:0006355 | |
Bda14g00300 | 329 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 4 | 326 | IPR045174 | GO:0003700|GO:0006355 | |
Bda14g00300 | 329 | ProSitePatterns | Zinc finger Dof-type signature. | 72 | 108 | IPR003851 | GO:0003677|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda09g00153 | Bda-Chr9:2388071 | Bda14g00300 | Bda-Chr14:2027799 | 3.36E-62 | dispersed | |
Bda14g00300 | Bda-Chr14:2027799 | Bda06g00517 | Bda-Chr6:7438568 | 5.18E-30 | dispersed | |
Bda14g00300 | Bda-Chr14:2027799 | Bda05g00969 | Bda-Chr5:58157463 | 3.61E-65 | wgd | |
Bda14g00300 | Bda-Chr14:2027799 | Bda07g00589 | Bda-Chr7:7221890 | 1.19E-48 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17008 | PF02701 | zf-Dof | 1.40E-32 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda14g00300 | - | - | vvi:100258172 | 361.303 |