Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00300 ATGGTTTTCTCATCAATACCAGTCTATTTGGATCCACCAAACTGGCAACAGCAAACAAATCATCAATCTGGAGTTGGCTGTGAAAACACTCCAACGCCACATTTACCACCACCTTTACCTGTTGCTGGAGGTGGATCCGGTTCGATCAGGCCGAGTTCGTTGGCTGATCGTGCCCGTCTAGCCAAGATGCCACAGCCGGAGGTTGCCCTAAAGTGCCCAAGATGCGAATCCACAAACACGAAGTTTTGTTACTACAATAATTACAACTCTTCTCAACCTCGCCATTTTTGTAAGAACTGCAGGCGATATTGGACGAGAGGAGGTGCCCTGAGGAACGTCCCGGTTGGGGGTGGTAGCAGAAGGAACAAAAGAAGTAAAGCCGGAAATGGATCGAAATCTCCATTGATGGAGAAGAAAACTGCGTCAAGCTCTACTGCTACAGTTTCTTCAAGTAGCTGCACTTCTGATATGGTTGGCCATTTGATCCGTCCAGAATCTTCGCAGCTGCAACTTTTTCCATATCATCATCTGAGTGATTATAGTATCGGGAATGTGGGCATGAGTTTCGCCGGAATCCAACCACCTACTGTTGGCGAAGATAGTGTTAGATTTCCGATCGCTACAGATTCAAGTGGTTGCCCGGGCGGCAGTGGTGATCCCATGTTTTCCTGTGCAATTACTGAAAATTGGAGATTACAACAAGTTCAGCAATTTCCATTTCTATCAAATATGGAAAATTCAAATGGGTTATATGCGTTGGGGTGTTATAATGAAGGTGGCGCAGAGCGACCCAATTATCAGCTTCATCGCTTTTCGAAGCCCTTAGCTTCTGGGGTTTCACGTTTGGTAACAGAGAAAATGGAGGAAAATCAAGGGTTTAATTTTCCGAGAAACTTTCTGGGTGTTCAAGGAAATGATCAATTCTGGGGAGGAAACAATGCCTGGAATGACCTTTCTGGTTTCAGTTCGTCATCCACCAGCCACCTCTAA 990 45.66 MVFSSIPVYLDPPNWQQQTNHQSGVGCENTPTPHLPPPLPVAGGGSGSIRPSSLADRARLAKMPQPEVALKCPRCESTNTKFCYYNNYNSSQPRHFCKNCRRYWTRGGALRNVPVGGGSRRNKRSKAGNGSKSPLMEKKTASSSTATVSSSSCTSDMVGHLIRPESSQLQLFPYHHLSDYSIGNVGMSFAGIQPPTVGEDSVRFPIATDSSGCPGGSGDPMFSCAITENWRLQQVQQFPFLSNMENSNGLYALGCYNEGGAERPNYQLHRFSKPLASGVSRLVTEKMEENQGFNFPRNFLGVQGNDQFWGGNNAWNDLSGFSSSSTSHL 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2027799 2028913 - Bda027035.1 Bda14g00300 20351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00300 329 MobiDBLite consensus disorder prediction 111 152 - -
Bda14g00300 329 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 4 326 - -
Bda14g00300 329 MobiDBLite consensus disorder prediction 135 152 - -
Bda14g00300 329 Pfam Dof domain, zinc finger 69 124 IPR003851 GO:0003677|GO:0006355
Bda14g00300 329 ProSiteProfiles Zinc finger Dof-type profile. 70 124 IPR003851 GO:0003677|GO:0006355
Bda14g00300 329 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 4 326 IPR045174 GO:0003700|GO:0006355
Bda14g00300 329 ProSitePatterns Zinc finger Dof-type signature. 72 108 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00153 Bda-Chr9:2388071 Bda14g00300 Bda-Chr14:2027799 3.36E-62 dispersed
Bda14g00300 Bda-Chr14:2027799 Bda06g00517 Bda-Chr6:7438568 5.18E-30 dispersed
Bda14g00300 Bda-Chr14:2027799 Bda05g00969 Bda-Chr5:58157463 3.61E-65 wgd
Bda14g00300 Bda-Chr14:2027799 Bda07g00589 Bda-Chr7:7221890 1.19E-48 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17008 PF02701 zf-Dof 1.40E-32 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00300 - - vvi:100258172 361.303