Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00327 ATGGTATCAGATACTTTTTTTATGAGGATTGTATCACCTTGCTGGAGACCTTCAGTTGAAGATGAAAAGTCCAGTGGAGGGGGAGACTCGAACGGGAGGGTTGATGGGTTACTGTGGTACAAAGATTATGGACGACACATGAATGGGGAATTCTCCATGGCAGTAATTCAAGCAAACAACTTATTGGAAGATCATTGCCAACTTGAATCAGGGCCGATAAGCTTCTCTGAATCGGGTCCTCAAGGAACAGTTGTTGGTATTTATGATGGTCATGGAGGTCCAGAAGCTGCCCAGTTCATAAATGATCATATTTTTAACAATATCAGGAAACTCACGTCAGAAAATCAAGGATTATCAGCCGAAGTTATTAACAAGGCTTTCTTGGCAACGGAAGAAGAATTCCTGTCTCTTGTGAAGAATCAATGGGCCAATAAGCCACAGATTGCTTCTGTTGGTTCATGTTGTTTGGTGGGCATAATATGTGGTGGATTTCTATATATTGCAAATGCAGGAGATTCTCGAGCGGTTTTAGGCAGACTCGAGAAGACTGTTAAAGAAGTCAAAGCGATACAATTATCAGCAGAGCACAATGCAAGCATGGAATTTGTGAGAGAGGAGTTGCGCTCTTTGCATCCAGATGATCCACAGATTGTGGTCTTGAAGCACAAGGTTTGGCGTGTGAAGGGTTTAATACAGGTTTCTAGATCTATTGGTGATGCCTATTTGAAGAGGTCAGAGTTCAATCGGGAGCCTTTGTTGCCTAAGTTTAGATTGTCACAACCATTCCACAAGCCGATTCTTAAAGCTGAGCCCACAATCTCAGTGGAGAAGCTTTGTTCTGAAGATCAGTTCTTAATATTGGCATCAGATGGCTTATGGGAGTATCTAACCAATCAAGAGGCTGTTGATATCGTGCAGAGCTGTCCACGTAGTGGGATTGCAAGAAAACTAGTGAAAACAGCATTGTGTGAAGCAGCAAAGAAGAGAGAAATGAGATACTCAGATTTGAAGAAGATAGATAGAGGCGTGAGAAGACACTTTCATGATGATATAACAGTCATTGTGTTGTTCCTTGATTCTCATCTCATCAGCAGGAGCTCATGGAGTGGCCCTCTGCTATCAATCAGGTGGGGAAGTGGGATTTCTGTCTAG 1152 42.53 MVSDTFFMRIVSPCWRPSVEDEKSSGGGDSNGRVDGLLWYKDYGRHMNGEFSMAVIQANNLLEDHCQLESGPISFSESGPQGTVVGIYDGHGGPEAAQFINDHIFNNIRKLTSENQGLSAEVINKAFLATEEEFLSLVKNQWANKPQIASVGSCCLVGIICGGFLYIANAGDSRAVLGRLEKTVKEVKAIQLSAEHNASMEFVREELRSLHPDDPQIVVLKHKVWRVKGLIQVSRSIGDAYLKRSEFNREPLLPKFRLSQPFHKPILKAEPTISVEKLCSEDQFLILASDGLWEYLTNQEAVDIVQSCPRSGIARKLVKTALCEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVLFLDSHLISRSSWSGPLLSIRWGSGISV 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2222047 2224863 + Bda027061.1 Bda14g00327 20378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00327 383 CDD PP2Cc 51 358 IPR001932 -
Bda14g00327 383 SUPERFAMILY PP2C-like 59 359 IPR036457 -
Bda14g00327 383 SMART PP2C_4 44 356 IPR001932 -
Bda14g00327 383 Pfam Protein phosphatase 2C 81 327 IPR001932 -
Bda14g00327 383 PANTHER PROTEIN PHOSPHATASE 2C 38-RELATED 9 380 - -
Bda14g00327 383 ProSitePatterns PPM-type phosphatase domain signature. 84 92 IPR000222 GO:0043169
Bda14g00327 383 Gene3D - 41 367 IPR036457 -
Bda14g00327 383 ProSiteProfiles PPM-type phosphatase domain profile. 50 358 IPR001932 -
Bda14g00327 383 PANTHER ALPHABET, ISOFORM E-RELATED 9 380 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00327 Bda-Chr14:2222047 Bda14g00978 Bda-Chr14:7906517 0 dispersed
Bda15g01025 Bda-Chr15:19217571 Bda14g00327 Bda-Chr14:2222047 8.60E-23 dispersed
Bda03g01739 Bda-Chr3:56797362 Bda14g00327 Bda-Chr14:2222047 6.50E-127 transposed
Bda14g00327 Bda-Chr14:2222047 Bda15g00189 Bda-Chr15:4444598 2.22E-97 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00327 K01102 - jre:109013075 632.098