Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda14g00333 | ATAGTTTTTCTCAGTAGCCAAACAATGGAGAAGCTCAGATGCTGTAACGGCTTCCTGGAAAACTCTAAACCCTACTTTGCAATGATCTCTCTGCAATTTGGATACGCCGGAATGAATATAATCACCAAAGTTTCTCTGAACAGAGGGATGAGTCATTATGTTCTTGTCGTCTACCGCCATGCCTTCGCCACTCTGGCCATAGCTCCCTTTGTTCTTTTCTTCGAGAGGAGGGGGCAGCCGAAAATAACTTTCAAAGTTTTCATGCAGATATTCGTTCTTGCTCTACTTGGGCCTGTTATTGATCAAAACTTTTACTACGCCGGTCTGAAGTACACTTCGCCGACTTTCTCGTGTGCTATGAGCAACATGCTACCAGCAATGACATTTGTCATGGCAGTGATATTTAGTAGGATGGAGAAGTTGAATATAAGAAAGGTTAGATGCCAAGCGAAAATAGCTGGAACTTTGGTGACGGTGGCCGGAGCTATGTTGATGACCTTATACAAAGGAAATATTGTAGAGATGCCTTGGTCGAAGCATGTTCATCCGAGATATGCTTCTGAGAGTACTGAATCAAGCAGCAAGGACTGGTTCAAAGGCTCCATTTTCGTCATCATTGCTACACTTGCTTGGTCTTCTCTCTTTGTTTTACAGAACCAAGCTTTGAAGACGTACAAGAATCATCAATTCTCTCTCACTACGTTGGTGTGCTTTGTCGGGACTTTACAAGCTATTGCTGTGACTTTTGTGATGGAACATAAATCCTCTGTTTGGAGAATTGGCTGGGACATGAACCTCCTTGCTGCTGCTTATGCTGGTATTGTAACTTCAAGTCTGTCTTATTACATCCAAGGGTTGGTAATGAGAAAAAGAGGTCCTGTTTTTGCAACTGCTTTCAGCCCTCTGATGATGATCATAGTAGCAATCATGGGCTCTTTCATTCTCGCAGAAAAGATCTATCTTGGAGGGGTTCTTGGAGCTATTTTGATAGTGATTGGACTTTACTCAGTTTTGTGGGGAAAACATAAAGAAAAGAACTTAGACAGCAAAGAGGAAGACGAAATTCCAGAGGCAATAAAGGGTCCTCATACAAATGGAAATGTGATTTCCATCATAGAAATGGAAGCCAATGAAGTCCAAATGGAAAAAAGCAAAGAAGCTAACAAACTATCTTCCATGGCTATCAGCATTCCTAGTTTTCCAGAACCCCCCATGAAAGCAGTTTCCCAAATGCCAAAACCCTAA | 1245 | 42.01 | IVFLSSQTMEKLRCCNGFLENSKPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATLAIAPFVLFFERRGQPKITFKVFMQIFVLALLGPVIDQNFYYAGLKYTSPTFSCAMSNMLPAMTFVMAVIFSRMEKLNIRKVRCQAKIAGTLVTVAGAMLMTLYKGNIVEMPWSKHVHPRYASESTESSSKDWFKGSIFVIIATLAWSSLFVLQNQALKTYKNHQFSLTTLVCFVGTLQAIAVTFVMEHKSSVWRIGWDMNLLAAAYAGIVTSSLSYYIQGLVMRKRGPVFATAFSPLMMIIVAIMGSFILAEKIYLGGVLGAILIVIGLYSVLWGKHKEKNLDSKEEDEIPEAIKGPHTNGNVISIIEMEANEVQMEKSKEANKLSSMAISIPSFPEPPMKAVSQMPKP | 414 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 2320587 | 2322802 | + | Bda027067.1 | Bda14g00333 | 20384 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda14g00333 | 414 | Pfam | EamA-like transporter family | 24 | 165 | IPR000620 | GO:0016020|GO:0016021 | |
| Bda14g00333 | 414 | Pfam | EamA-like transporter family | 199 | 338 | IPR000620 | GO:0016020|GO:0016021 | |
| Bda14g00333 | 414 | PANTHER | WAT1-RELATED PROTEIN | 18 | 379 | IPR030184 | GO:0016021|GO:0022857 | |
| Bda14g00333 | 414 | PANTHER | WAT1-RELATED PROTEIN | 18 | 379 | - | - | |
| Bda14g00333 | 414 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 58 | 169 | - | - | |
| Bda14g00333 | 414 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 242 | 344 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda01g00511 | Bda-Chr1:32098394 | Bda14g00333 | Bda-Chr14:2320587 | 1.34E-80 | dispersed | |
| Bda03g00533 | Bda-Chr3:4434334 | Bda14g00333 | Bda-Chr14:2320587 | 3.12E-126 | dispersed | |
| Bda03g00845 | Bda-Chr3:7300685 | Bda14g00333 | Bda-Chr14:2320587 | 2.01E-86 | dispersed | |
| Bda03g01511 | Bda-Chr3:53576155 | Bda14g00333 | Bda-Chr14:2320587 | 3.02E-173 | dispersed | |
| Bda11g00413 | Bda-Chr11:4446787 | Bda14g00333 | Bda-Chr14:2320587 | 2.03E-63 | dispersed | |
| Bda12g01113 | Bda-Chr12:43203493 | Bda14g00333 | Bda-Chr14:2320587 | 2.19E-90 | dispersed | |
| Bda13g01485 | Bda-Chr13:37769446 | Bda14g00333 | Bda-Chr14:2320587 | 6.99E-113 | dispersed | |
| Bda14g00333 | Bda-Chr14:2320587 | Bda15g00113 | Bda-Chr15:3501403 | 0 | dispersed | |
| Bda14g00333 | Bda-Chr14:2320587 | Bda14g00309 | Bda-Chr14:2083309 | 2.78E-93 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda14g00333 | - | - | pop:7462806 | 617.461 |