Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00336 AATTATATGGCGGAGGCTCCGACGAGTCCAGCTCGTGGGAGCCACGACAGTGGCGGCGAGCAGAGTCCGAGAACCGGAGTGCGAGAGCAAGACCGATATCTTCCTATCGCTAACATTAGCAGGATCATGAAGAAGGCGTTGCCTGCCAACGGCAAAATTGCCAAAGATGCCAAGGATACAGTCCAGGAATGCGTCTCCGAATTTATCAGCTTCATCACTAGCGAGGCCAGCGATAAATGCCAGAAAGAGAAGAGGAAGACAATCAATGGTGACGATTTGTTGTGGGCAATGGCAACGTTAGGATTTGAGGACTATATCGATCCGCTTAAGGTGTATCTAAATAGGTATAGAGAGGTGAGTCATGAGTTTTTATTTTGGTTTGTCTCTTGA 390 47.95 NYMAEAPTSPARGSHDSGGEQSPRTGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKVYLNRYREVSHEFLFWFVS 129
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2403587 2404220 + Bda027073.1 Bda14g00336 20387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00336 129 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 33 97 IPR003958 -
Bda14g00336 129 MobiDBLite consensus disorder prediction 1 30 - -
Bda14g00336 129 ProSitePatterns NF-YB/HAP3 subunit signature. 64 80 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bda14g00336 129 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED 3 119 - -
Bda14g00336 129 PRINTS CCAAT-binding transcription factor subunit A signature 61 79 - -
Bda14g00336 129 PRINTS CCAAT-binding transcription factor subunit A signature 99 117 - -
Bda14g00336 129 PRINTS CCAAT-binding transcription factor subunit A signature 80 98 - -
Bda14g00336 129 Gene3D Histone, subunit A 21 122 IPR009072 GO:0046982
Bda14g00336 129 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 3 119 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bda14g00336 129 SUPERFAMILY Histone-fold 30 119 IPR009072 GO:0046982
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda14g00336 Bda15g00184 CCT
Bda14g00336 Bda15g00184 ECH
Bda14g00336 Bda15g00376 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00336 Bda-Chr14:2403587 Bda14g01019 Bda-Chr14:8589455 1.60E-53 dispersed
Bda14g00905 Bda-Chr14:7036190 Bda14g00336 Bda-Chr14:2403587 3.57E-19 dispersed
Bda14g00336 Bda-Chr14:2403587 Bda15g00376 Bda-Chr15:6716276 2.12E-74 wgd
Bda14g00336 Bda-Chr14:2403587 Bda15g00184 Bda-Chr15:4420974 2.05E-80 wgd
Bda14g00336 Bda-Chr14:2403587 Bda03g00753 Bda-Chr3:6355371 3.39E-70 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17010 PF00808 CBFD_NFYB_HMF 2.80E-28 CL0012 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00336 K08065 - pop:7489621 224.172