Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00338 ATGGCTTCTCCCCCAAGAAAACCGACGGGTCTTATTGTTCGGAACCTATCTCCATATTCTCCATCTTCTTCCTCTTCACCGCCTGCCTTTTCTTCACCAGTCTCTCGGTCGAGCAATATTCTGCCGCCGGCTTCTCCTCCGGCCGTCGTACTCAGCCCATGTGCTGCGTGCAAAATTCTTCGGCGGCGATGCGTGGACAAGTGCGTTTTAGCGCCGTATTTTCCTCCATCTGAACCTCTCAAGTTCACCATTGCTCATAGAGTCTTTGGAGCAAGCAATATAATCAAGTTATTGCAGGCATATATTCTTTTTTCCTTTTATTCATTTTTAGAACTTCCTGAGGGTCAAAGAGCAGATGCAGTGAGCAGTATGGTGTACGAGGCAAACGCGAGAATCAGAGACCCGGTGTACGGAAGCGCCGGCGCCATTTGCCACCTCCAGAAGCAAGTGAGCGAGCTTCAGACCCAGCTGGCCAGAGCTCAGGCCGACCTACTCAACCTGCAGCTGCAGCAGAGTAATCTCATCGACTTGTTCTGCGTGGAAATGGGCCACTCATTGGAGGAGAACCAAACTCCGGCGCCATTGTCACAACTCCATCAGAACTCCTCCGGCACTACGCCTTCTCTCAATGATCCCTCCACCTGGGGGCCTCTTTGGACATAA 663 51.73 MASPPRKPTGLIVRNLSPYSPSSSSSPPAFSSPVSRSSNILPPASPPAVVLSPCAACKILRRRCVDKCVLAPYFPPSEPLKFTIAHRVFGASNIIKLLQAYILFSFYSFLELPEGQRADAVSSMVYEANARIRDPVYGSAGAICHLQKQVSELQTQLARAQADLLNLQLQQSNLIDLFCVEMGHSLEENQTPAPLSQLHQNSSGTTPSLNDPSTWGPLWT 220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2427324 2428453 + Bda027075.1 Bda14g00338 20389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00338 220 ProSiteProfiles LOB domain profile. 52 164 IPR004883 -
Bda14g00338 220 Pfam Lateral organ boundaries (LOB) domain 53 161 IPR004883 -
Bda14g00338 220 Coils Coil 150 170 - -
Bda14g00338 220 MobiDBLite consensus disorder prediction 1 31 - -
Bda14g00338 220 MobiDBLite consensus disorder prediction 190 220 - -
Bda14g00338 220 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 36 192 - -
Bda14g00338 220 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 36 192 - -
Bda14g00338 220 MobiDBLite consensus disorder prediction 15 31 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00178 Bda-Chr9:2626266 Bda14g00338 Bda-Chr14:2427324 6.72E-69 dispersed
Bda14g00236 Bda-Chr14:1600223 Bda14g00338 Bda-Chr14:2427324 2.45E-48 dispersed
Bda14g00338 Bda-Chr14:2427324 Bda15g00282 Bda-Chr15:5610058 2.32E-48 dispersed
Bda14g00338 Bda-Chr14:2427324 Bda07g00619 Bda-Chr7:7551742 3.53E-69 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17011 PF03195 LOB 2.30E-36 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00338 - - cic:CICLE_v10033956mg 208.379