Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00345 ATGGCTTCCAACACGTTAATGAGCTGCGGAATCGCGGCAGTGGCGTACCCGTCTGTCCTCTCGTCGTCCAAATCGAAGTTCGCCGCTTCTTTCGCACTTCCTTCGGGATATGCCAATGCGTCGTCACGCTTCTCCATGTCCGCAGAATGGATGCCCGGCCAGCCAAGACCTCCATACCTGGATGGTTCTGCTCCGGGAGATTTTGGGTTTGACCCACTTGGGTTGGGTTCAGTGCCCGAGAATCTGGAGAGGTTCAAAGAGTCTGAACTCATCCATTGCCGATGGGCCATGCTTGCTGTTCCTGGGGTCTTGATTCCAGAGGCGTTGGGGTTAGGCAACTGGGTGAAGGCTCAAGAGTGGGCTGCTATTCCGGGAGGACAAGCCACCTATTTGGGGCAGCCAGTTCCTTGGGGCACATTACCTACAATTTTGGTGATTGAGTTTCTTGCTATTTCTTTCTTCAAGGAATACAAAATCAAAGAGGTTAAAAATGGTCGGCTAGCGATTTTGGCATTTGTTGGGTTCTGTGTGCAGCAATCAGCATACCCAGGGACAGGGCCATTGGAGAACTTGGCCTCTCACTTGGCTGACCCATGGCACAACAACATTGGCGATATCATCATCCCCAGAGGGTTGTAA 639 52.11 MASNTLMSCGIAAVAYPSVLSSSKSKFAASFALPSGYANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGSVPENLERFKESELIHCRWAMLAVPGVLIPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAISFFKEYKIKEVKNGRLAILAFVGFCVQQSAYPGTGPLENLASHLADPWHNNIGDIIIPRGL 212
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2494774 2496171 + Bda027084.1 Bda14g00345 20396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00345 212 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 22 154 IPR001344 GO:0009765|GO:0016020
Bda14g00345 212 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 155 205 - -
Bda14g00345 212 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 22 154 - -
Bda14g00345 212 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 155 205 IPR001344 GO:0009765|GO:0016020
Bda14g00345 212 Gene3D Chlorophyll a/b binding protein domain 155 209 - -
Bda14g00345 212 SUPERFAMILY Chlorophyll a-b binding protein 39 207 - -
Bda14g00345 212 Pfam Chlorophyll A-B binding protein 57 154 IPR022796 -
Bda14g00345 212 Pfam Chlorophyll A-B binding protein 154 179 IPR022796 -
Bda14g00345 212 Gene3D Chlorophyll a/b binding protein domain 51 154 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda14g00345 Bda15g00170 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00345 Bda-Chr14:2494774 Bda03g01535 Bda-Chr3:54300923 2.30E-32 dispersed
Bda14g00345 Bda-Chr14:2494774 Bda15g00170 Bda-Chr15:4252509 1.31E-142 wgd
Bda14g00345 Bda-Chr14:2494774 Bda05g01028 Bda-Chr5:58739367 1.46E-32 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00345 K08907 - pvy:116130060 374.785