Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00352 CTCCATTCGATAGCTATGGAGCAGTCGAGCAGAGAAAATGGCGGAGAAGGGCCGACAAGCCTCTGCAAAAGTGCAGACCCGTTGAACTGGGGATCGCTGGCGGAGGGCCTGAGAGGGAGCCATTTGGAGGAGGTGAAGCGGATGGTGGACGAATATCGGAAGGTGGTGGTTCTGCTAGGCGGTGAAACTCTGACGATAGGTCAAGTTACCTCCATTGCCGCCGGGGCGGTGACGGTGGAGCTGTCGGAGGAAACAAGGGAGAGAGTGAAGGCCAGCAGTGATTGGGTCCTTGAGAGTATGAAACAGGGAACTGATAGCTACGGAGTTACGACCGGTTTTGGTGCAACCTCCCATAGACGGACCAAGGAAGGTGGTGCTCTCCAAAAGGAGCTAATCAGGTTTTTGAATGCTGGAATATTTGGAAACGGGAAAGACAGAAGTCATACATTACCGGAGTCGGTGAGCAGAGCAGCCATGGTAGTGAGGATGAACACCCTTTTGCAGGGCTACTCCGGCATCAGATTTGAGATCCTGGAAGCCATAGCTAAGCTTCTCAATCACAACATTACTCCCTGCCTTCCTCTCAGAGGAACTATCACCGCTTCTGGAGATTTAGTCCCTCTCTCTTACATTGCAGGTTTATCCATTGTTAGCAACATAATTTTGTGTCTCTATGTCTTCTCTTGCTCACCTTTTGATCCGGGATCTGCAGGGTTGTTAGCTGGGAGGCCGAACTCGAAGGCTGTCGGTCCGAAAGGGGAGTCTCTTAATGCTTCCGAAGCCTTTCGACTGGCCGGCATAGGTGGAGGGTTCTTTGAGCTGCAGCCAAAAGAGGGTCTTGCTCTGGTTAATGGCACTGCAGTCGGGTCTGGTTTAGCCTCTACTGTTCTTTTCGAGACCAACATTCTTGCACTTCTTGCCGAGGTTTTGTCGGCAATTTTCGCTGAAGTTATGCAAGGAAAGCCGGAATTTACGGACCATTTGACGCATAGATTGAAGCATCATCCTGGGCAGATTGAAGCTGCAGCCATAATGGAGCACATTTTAGATGGAAGCTCTTACGTCAAATCAGCTCAAAAACTTCATGAGATGGACCCCCTGCAAAAGCCAAAACAGGATAGATATGCTCTGAGAACATCTCCGCAATGGCTCGGACCTCAAATCGAAGTCATCCGGGTCGCCACCAAGATGATTGAACGGGAAATCAACTCCGTCAATGATAACCCGTTGATCGACGTTTCGAGGAACAAGGCTTTACATGGGGGCAATTTCCAAGGTACTCCAATTGGTGTCTCGATGGACAATACTCGCCTAGCCATTGCTTCTATTGGAAAGCTCATGTTTGCCCAATTTTCCGAGCTAGTCAATGACTTTTACAACAATGGCTTGCCTTCAAATCTCTCCGCCAGTCGTGATCCAAGCTTAGACTATGGATTCAAGGGTGCCGAAATAGCCATGGCGTCTTACTGCTCAGAGCTTCAATTCTTGGCCAATCCAGTCACGAATCACGTGCAGAGTGCAGAGCAACACAACCAGGATGTGAACTCTCTTGGATTAATTTCTGCAAGAAAAACAGCCGAAGCAGTAGACATATTGAAGCTCATGTCCTCCACTTTCTTAGTGGCATTATGCCAAGCAGTTGATCTGCGTCATTTGGAGGAAAACATAAAGAACGCAGTTAAAAACACAGTCGGCCAAGTATCAAAGAAGGTCTTAATAATGGGATTAAATGGAGGACTCCACCCAATCAGATTCAGCGAAAAAGATTTACTCAGAGTGGTAGACAGAGAGCACGTATTCTCGTACATCGACGACCCATGCAGCGCCACATACCCATTGATTCAAAAACTGAGGCAAGTTCTGGTAGACCATGCGCTCAGCAACGGCGACAGAGAGCGAAATCCAAGCACGTCCATTTTCCAGAAAATCGGAGCTTTCGAGGCAGAACTGAAAACCCTATTGCCTAGAGAAGTGGAAAACGCGAGGAAAGAGTACGAAAATGGAAACCCGAGTATTCAAAACCAGATTAAGGAGTGCAGATCATACCCATTATACAGGTGGGCGAGAGAAACAGTAGGGACAAAACTTCTGACCGGAGAGCAAGTTAGATCTCCGGGTGAAGAATTTGAGAAAGTATTCTGTGCAATCTGTGATGGGAAACTGATTGATCCATTGCTCGAGTGTTTGAAAGACTGGAGTGGCGCTCCTCTTCCTATTTGCTAA 2223 48.13 LHSIAMEQSSRENGGEGPTSLCKSADPLNWGSLAEGLRGSHLEEVKRMVDEYRKVVVLLGGETLTIGQVTSIAAGAVTVELSEETRERVKASSDWVLESMKQGTDSYGVTTGFGATSHRRTKEGGALQKELIRFLNAGIFGNGKDRSHTLPESVSRAAMVVRMNTLLQGYSGIRFEILEAIAKLLNHNITPCLPLRGTITASGDLVPLSYIAGLSIVSNIILCLYVFSCSPFDPGSAGLLAGRPNSKAVGPKGESLNASEAFRLAGIGGGFFELQPKEGLALVNGTAVGSGLASTVLFETNILALLAEVLSAIFAEVMQGKPEFTDHLTHRLKHHPGQIEAAAIMEHILDGSSYVKSAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRVATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRDPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTFLVALCQAVDLRHLEENIKNAVKNTVGQVSKKVLIMGLNGGLHPIRFSEKDLLRVVDREHVFSYIDDPCSATYPLIQKLRQVLVDHALSNGDRERNPSTSIFQKIGAFEAELKTLLPREVENARKEYENGNPSIQNQIKECRSYPLYRWARETVGTKLLTGEQVRSPGEEFEKVFCAICDGKLIDPLLECLKDWSGAPLPIC 740
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2581706 2584783 + Bda027091.1 Bda14g00352 20403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00352 740 Pfam Aromatic amino acid lyase 64 561 IPR001106 -
Bda14g00352 740 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 197 213 IPR022313 GO:0016841
Bda14g00352 740 Gene3D - 553 674 IPR023144 -
Bda14g00352 740 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 237 740 - -
Bda14g00352 740 Gene3D Fumarase/aspartase (Central domain) 287 734 - -
Bda14g00352 740 CDD PAL-HAL 62 550 IPR001106 -
Bda14g00352 740 PANTHER HISTIDINE AMMONIA-LYASE 237 740 IPR001106 -
Bda14g00352 740 MobiDBLite consensus disorder prediction 1 23 - -
Bda14g00352 740 PANTHER HISTIDINE AMMONIA-LYASE 19 216 IPR001106 -
Bda14g00352 740 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 19 216 - -
Bda14g00352 740 SUPERFAMILY L-aspartase-like 26 740 IPR008948 GO:0003824
Bda14g00352 740 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 237 730 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bda14g00352 740 MobiDBLite consensus disorder prediction 1 17 - -
Bda14g00352 740 Gene3D - 235 286 IPR024083 -
Bda14g00352 740 Gene3D - 18 221 IPR024083 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda14g00352 Bda15g00163 CCT
Bda14g00352 Bda15g00163 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00352 Bda-Chr14:2581706 Bda15g00163 Bda-Chr15:4189266 0 wgd
Bda14g00352 Bda-Chr14:2581706 Bda03g00739 Bda-Chr3:6273362 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00352 K10775 - cit:102607860 1169.45