Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00363 ATGTATGGAGACCTGCTTCGTAGGGTGCAGCTTTTGAGCCCTTTCTTTGATGAACTGAGGGACTTGGACGAGGAGCTTGGAGAAGAAGTCATCAAGGGTTTGGAGTCGCTGAAAATTGCTTTGGATTCTGCTCTTGAGCTTCTCAAGGCAGTCAATCGAGGAAGCAAGCTTTATCAGGCTTTGGAAATAGAGATCACTAGTGGAAAGTTTCGTGATGTCACAGAACAAATTGAAAAAGCACTATGCAGAATTCCTTTGGCTGAGCTTGATCTATCAGATGAGGTTAGAGAACAGACTGAACTTGTACATGCTCAATTCAAACGAGCGAAAGGGAAAATCGACTTGCCTGATTTGCAATTATTTACTGATTTAGCCATAGCAGAGAAAGAAAAAGACCCCAACCCCGTAATAATGAGAAGACTTTCAGAAATGTTGCACCTTGGGACTATAGCTGATCTGAAAAAAGAGGCTCTTGCGTTCCATGATTTGGTCATCTTAAGTGGCGGAGAGCTTGGAGAATCTTTTGGGAAAATGTCATCCCTCCTAAAGAAGCTAAACGATTATGTACTAAAGAAAAATTCAGAAGTCCATGAAAATGAAAGAGATAAAGGTTTTCTCAAACACAGATGTCCTGTTATCCCCGATGATTTTCGGTGCCCGATATCTCTTGAATTGATGAGAGATCCTGTCATTGTCTCCACTGGACAGACATATGAAAGATCTTGCATTCAAAAATGGTTAGACGCAGGACACAGAACCTGTCCAAAAACACAACTTGCGTTATTGCATATGGCTCTAACTCCTAACTACGCCTTGAAGAGTCTGATTGCTTTGTGGTGTGAGAGTAATGGCATTGAGCTACCCAAAAAACAAGGAAATGGCAGAAACAGAAAAGCTGGCTCCAGTTTTTCTGATTGCGACCAAGGTACAATTGAGGTTTTACTCACAAAATTGAAGGACGGATCTCAAGAGCAGAAACGAGCTGCTGCAGGCGAGCTCCGTTTACTAGCAAAGAGGAACACAGATTATAGAGTTTGTATCGCAGAGGCTGGGGCCATTCCTCTTCTTGTAAAACTTCTATCCTCTGAAGATCTTCGAACCCAAGAGCATGCTGTCACAGCTCTTTTGAACCTTTCCATTAATGACAGTAACAAAAGAACTATAGTAGAAGTTAGGGCTATACCATCTATAGTGGAAGTGCTGAAAAATGGGAGCATGGAGGCGAGAGAAAATGCAGCAGCCACACTTTTCAGTTTATCCGTAATAGATGAAAACAAAATGGCAATTGGAGCATCTGGGGCTATTCCGGCCCTCATTACCTTACTTTGTGATGGGTCTCCACGGGGAAAGAAAGATGCTGCAACTGCGATTTTCAATCTCTCGATCTATCAAGGAAACAAGGCAAGGGCTGTGAGGGCAGGGATCGTGAACCCACTTATGAGTTTTCTTAAAGATGTTGGGGGTGGTATGGTGGATGAGTCACTGGCAATCATGGCCATTCTCTCAAGCCATCAAGAAGGGAAGGCCGCAATTGGTGAAGCCGAGCCAATCGCTGCTCTGCTCGAGGTTATAAAAACGGGCTCTCCTCGAAACAAGGAAAATGCTACTTCCATACTGTGGTCATTGTGTGCCAACGATTTGAAGCAGTTGGAAACAGCCAGACAGCTTGGTGGAGAAGAAGCAATGAAAGATTTGTCAGAGAACGGCACTGATAGAGCAAAGAGAAAAGCCGTGAACATTTTAGAGCAGCTTCGGCGGTTGGAGGTGACTTCTACCTCATGA 1782 43.77 MYGDLLRRVQLLSPFFDELRDLDEELGEEVIKGLESLKIALDSALELLKAVNRGSKLYQALEIEITSGKFRDVTEQIEKALCRIPLAELDLSDEVREQTELVHAQFKRAKGKIDLPDLQLFTDLAIAEKEKDPNPVIMRRLSEMLHLGTIADLKKEALAFHDLVILSGGELGESFGKMSSLLKKLNDYVLKKNSEVHENERDKGFLKHRCPVIPDDFRCPISLELMRDPVIVSTGQTYERSCIQKWLDAGHRTCPKTQLALLHMALTPNYALKSLIALWCESNGIELPKKQGNGRNRKAGSSFSDCDQGTIEVLLTKLKDGSQEQKRAAAGELRLLAKRNTDYRVCIAEAGAIPLLVKLLSSEDLRTQEHAVTALLNLSINDSNKRTIVEVRAIPSIVEVLKNGSMEARENAAATLFSLSVIDENKMAIGASGAIPALITLLCDGSPRGKKDAATAIFNLSIYQGNKARAVRAGIVNPLMSFLKDVGGGMVDESLAIMAILSSHQEGKAAIGEAEPIAALLEVIKTGSPRNKENATSILWSLCANDLKQLETARQLGGEEAMKDLSENGTDRAKRKAVNILEQLRRLEVTSTS 593
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2631344 2633820 - Bda027102.1 Bda14g00363 20414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00363 593 SUPERFAMILY ARM repeat 306 584 IPR016024 -
Bda14g00363 593 Gene3D - 298 590 IPR011989 -
Bda14g00363 593 SUPERFAMILY RING/U-box 213 288 - -
Bda14g00363 593 CDD RING-Ubox_PUB 217 258 IPR045210 -
Bda14g00363 593 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 14 1 588 - -
Bda14g00363 593 Pfam U-box domain 213 283 IPR003613 GO:0004842|GO:0016567
Bda14g00363 593 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 211 286 IPR013083 -
Bda14g00363 593 Pfam Armadillo/beta-catenin-like repeat 341 379 IPR000225 GO:0005515
Bda14g00363 593 Pfam Armadillo/beta-catenin-like repeat 423 461 IPR000225 GO:0005515
Bda14g00363 593 PANTHER U BOX DOMAIN-CONTAINING 1 588 - -
Bda14g00363 593 ProSiteProfiles U-box domain profile. 212 286 IPR003613 GO:0004842|GO:0016567
Bda14g00363 593 SMART Ubox_2 216 279 IPR003613 GO:0004842|GO:0016567
Bda14g00363 593 Gene3D - 2 87 IPR036537 GO:0007166
Bda14g00363 593 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 392 434 IPR000225 GO:0005515
Bda14g00363 593 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 351 393 IPR000225 GO:0005515
Bda14g00363 593 SMART arm_5 422 462 IPR000225 GO:0005515
Bda14g00363 593 SMART arm_5 381 421 IPR000225 GO:0005515
Bda14g00363 593 SMART arm_5 340 380 IPR000225 GO:0005515
Bda14g00363 593 SMART arm_5 504 544 IPR000225 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00818 Bda-Chr2:48770320 Bda14g00363 Bda-Chr14:2631344 0 dispersed
Bda09g01286 Bda-Chr9:44634210 Bda14g00363 Bda-Chr14:2631344 3.25E-55 dispersed
Bda12g00757 Bda-Chr12:35699324 Bda14g00363 Bda-Chr14:2631344 5.26E-96 dispersed
Bda14g00363 Bda-Chr14:2631344 Bda14g01078 Bda-Chr14:9435245 1.99E-157 dispersed
Bda14g00363 Bda-Chr14:2631344 Bda07g00590 Bda-Chr7:7230889 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00363 - - csv:101221065 833.558