Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00375 ATGACAGAAGCTATGGGTGCTGTTTTAACCTATAGACACGAACTGGGAATGAACTACAATTTCATTCGTCCAGATCTTATTGTGGGCTCATGTCTTCAGACTCCACAAGATGTCGATAAGCTTCGACAAATAGGAGTGAAAACAATATTTTGCTTGCAGCAAGATCCAGATTTGGAATATTTTGGGGTTGATATTAGTGCCATAAGAGAGTATGCAAAGACATTTGATGACATTGAGCATTTGCGTGCTGAGATAAGCAGGGATTTTGATGCGTATGATTTGCGCTTGAGATTGCCATCTGTTATTAGCAAATTATTCAAGGCCATAAACAGGAATGGAGGCGTGACTTATATACATTGCACAGCTGGGCTTGGGAGAGCTCCTGCTGTTGCGTTGGCATATATGTTCTGGGTTCAAGGCTACAAACTTAATCAAGCTCACGAATTGTTGCTGAGCAAGCGCTACTCCTTTCCAAAACTGGACGCCATAAAAAGTGCAACTGCTGATATTCTTACAGGCTTCAGGAAGAAACTTGTGACTTTGAAATGGGAAGATTACAAGTGCTCAACTGTAGAAATTTCTGGTCTTGATATTGGTTGGGGCCAGAGAGTGCCTTTAAAATTAGAACAGGGTTCGTGGATTCTCAATAGGGAATTACCGGAAGGACAATATGAATACAAGTACATTGTGGACGGCAAATGGACGTGTAATGAAAATGAGCCAGTTACCCCTCCCAACAAAGATGGCCACGTTAACAATTTTATTCAAGTCCTGGGCGACAATCCTAAAAGTGAAAGTACAACCCTGCAGAAGAGGCTGAGCGGTGATGATCCCGATCTCACGACGGAGGAAAGATGGAAAATAAGGCAATTTCTTGATGGAAAGTGA 888 42.12 MTEAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPQDVDKLRQIGVKTIFCLQQDPDLEYFGVDISAIREYAKTFDDIEHLRAEISRDFDAYDLRLRLPSVISKLFKAINRNGGVTYIHCTAGLGRAPAVALAYMFWVQGYKLNQAHELLLSKRYSFPKLDAIKSATADILTGFRKKLVTLKWEDYKCSTVEISGLDIGWGQRVPLKLEQGSWILNRELPEGQYEYKYIVDGKWTCNENEPVTPPNKDGHVNNFIQVLGDNPKSESTTLQKRLSGDDPDLTTEERWKIRQFLDGK 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2722992 2727582 - Bda027116.1 Bda14g00375 20426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00375 295 CDD E_set_AMPKbeta_like_N 179 257 - -
Bda14g00375 295 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 96 154 IPR000387 GO:0016311|GO:0016791
Bda14g00375 295 CDD DSP_laforin-like 17 165 IPR045204 GO:0019203|GO:0046838
Bda14g00375 295 Pfam Dual specificity phosphatase, catalytic domain 74 155 IPR000340 GO:0008138|GO:0016311
Bda14g00375 295 ProSiteProfiles Dual specificity protein phosphatase domain profile. 18 176 IPR020422 GO:0006470|GO:0008138
Bda14g00375 295 Gene3D Immunoglobulins 174 263 IPR013783 -
Bda14g00375 295 PANTHER PHOSPHOGLUCAN PHOSPHATASE DSP4, CHLOROPLASTIC 1 293 IPR030079 GO:0005982|GO:0007623|GO:0019203
Bda14g00375 295 SMART dsp_5 18 160 IPR020422 GO:0006470|GO:0008138
Bda14g00375 295 Gene3D Protein tyrosine phosphatase superfamily 11 291 IPR029021 -
Bda14g00375 295 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 160 IPR029021 -
Bda14g00375 295 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 1 293 - -
Bda14g00375 295 SUPERFAMILY E set domains 178 257 IPR014756 -
Bda14g00375 295 Pfam Glycogen recognition site of AMP-activated protein kinase 179 258 IPR032640 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01276 Bda-Chr1:48158877 Bda14g00375 Bda-Chr14:2722992 2.35E-30 dispersed
Bda14g00209 Bda-Chr14:1448520 Bda14g00375 Bda-Chr14:2722992 1.79E-42 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00375 - - zju:107413253 506.908