Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00436 ATGGCGTCTGGAACTGGAATTCCATACTTTGAAGATGTGAGGAGTAAACCTGAGATTGTTGACCCTCCTCAAAATGAAGATATGATGGATGTTGGCGAAAACGTGAATGATCCTGCTCAAAGCGGCTCAAAATCTAACTTGACTGTTTCTAGCAGTGTTCGGGACCTGTTGGAATGTCCTGTGTGTTTAAATGCTATGTACCCTCCCATTCATCAGTGTTCAAATGGTCATACGCTGTGCTCTGGTTGCAAGCCCAGGGTGCACAACCGGTGCCCCACTTGTAGGCATGAACTTGGCAATATTAGATGTCTAGCGCTGGAGAAGGTGGCTGCATCTCTAGAACTTCCATGTAAATACGAGAGCTTCGGTTGCTTGGGCATTTATCCTTATTACAGCAAGCTTAAACATGAATCCCAGTGTGTTTATAGGCCTTATAATTGTCCTTACGCTGGATCAGAATGTACAGTCATTGGTGATATACCTTATCTGGTGTCACACCTAAAGGATGATCATAATGTTGATATGCATACTGGCAGTACTTTCAACCATCGTTATGTCAAATCAAAACCACAAGAGGTTGAAAATGCCACATGGATGCTGACGGTTTTCAGCTGCTTTGGCCAGTACTTCTGTCTGCATTTTGAAGCATTTCAGCTTGGAATGGCTCCTGTCTACATAGCTTTTTTGCGTTTCATGGGTGATGATCACGAGGCAAAGAACTACAGCTACAGTCTGGAGGTTGGGGGAAATGGAAGAAAGATGATTTGGCAAGGAGTTCCAAGGAGTATTAGGGACAGTCATCGTAAAGTTCGAGACAGTTTTGATGGTCTCATCATCCAACGCAATATGGCTCTCTTTTTTTCAGGGGGTGACCGGAAGGAATTAAAGCTTAGGGTGACGGGAAGAATTTGGAAAGAACAG 921 43.97 MASGTGIPYFEDVRSKPEIVDPPQNEDMMDVGENVNDPAQSGSKSNLTVSSSVRDLLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYESFGCLGIYPYYSKLKHESQCVYRPYNCPYAGSECTVIGDIPYLVSHLKDDHNVDMHTGSTFNHRYVKSKPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDHEAKNYSYSLEVGGNGRKMIWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 307
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3144039 3146039 + Bda033932 Bda14g00436 20487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00436 307 PANTHER E3 UBIQUITIN-PROTEIN LIGASE DIS1 15 307 - -
Bda14g00436 307 ProSiteProfiles Zinc finger SIAH-type profile. 112 172 IPR013010 GO:0008270
Bda14g00436 307 CDD Sina 173 301 - -
Bda14g00436 307 ProSiteProfiles Zinc finger RING-type profile. 59 95 IPR001841 -
Bda14g00436 307 Pfam Seven in absentia protein family 101 300 IPR018121 GO:0005737|GO:0006511|GO:0007275
Bda14g00436 307 CDD RING-HC_SIAHs 57 95 - -
Bda14g00436 307 SUPERFAMILY RING/U-box 51 98 - -
Bda14g00436 307 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 168 300 IPR008974 GO:0005515
Bda14g00436 307 PANTHER E3 UBIQUITIN PROTEIN LIGASE SIAH 15 307 - -
Bda14g00436 307 SUPERFAMILY TRAF domain-like 112 304 - -
Bda14g00436 307 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 112 167 IPR013083 -
Bda14g00436 307 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 18 111 IPR013083 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda14g00436 Bda15g00095 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00286 Bda-Chr9:3537484 Bda14g00436 Bda-Chr14:3144039 8.79E-30 transposed
Bda14g00436 Bda-Chr14:3144039 Bda15g00095 Bda-Chr15:3204074 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00436 K04506 - rcu:8270897 606.675