Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00438 ATGCTAAATTTATTATTAGAATTGGATATTGCAGTCAGTAATGTGACTAGTTGTGCTTTTTATCAACCAGGTACACAGAAAAAGCTTGAGGAACTGTTAAAGCAATCAGGCAATAATTTATGTGCAGATTGTGGATCTCCTAATCCAAAATGGGTTTCCTTTAATTTTGGGACATTTATATGTATCAAGTGTTCAGGGGTGCATAGAAGCCTTGGGGTGCATATAACAAAGGTCTTATCAGTGAAGCTAGATGAGTGGAGTGATGAACAAGTTGATTCATTGATAAATAAGGGTGGTAATACTACAGTAAACAAGAAGTATGAAGCTTGCATCCCAGATAGCCAGAAAAAACCAAAACCGGAATCCAGTATAGAAGAACGATGTGATTTTATAAGAAACAAATATGAGCTGCTAAAGTTTTTGAGCCAGGAAGATCAACCAAAGTCTCATAAAAGGAATTCATCTTCTTCCCAAGTTTCTGTAAGCAATAATTCCACACAAGAGAAGAAACAATATGAAAAGCAAGCAACGAAACATCGCATTGGGAATGCATTTAGAAACAGCTGGGGAAGGAAAGATTCCGAATACAAGATCTCTAAGAAGACCAACTCCTTGGTGGCAAGCAATTCAATGGCGGGAATGGTTGAATTTGTTGGCTTGATCAAGGTCAATGTAGTGAGAGGCACCAATCTAGCAGTCAGAGACGTGATTACAAGCGACCCTTATGTGATTCTCACATTAGGCCATCAATCCGTGAAGACACGTGTGATTAAGAGTAATCTCAATCCAGTCTGGAACGAGAGTCTTATGCTTTCAATTCCAGAGCACATTCCTCCTCTAAAAATTCTTGTTTATGACAAAGACACGTTTTCAACTGACGACTTCATGGGGGATGCGGAAATCGACATTCAGCCACTTCTAACAGCAGCCAAGGCGTGCGAAACTTCTACAATCCACGAGTCGATTCAGCTCGGGAAGTGGATTGCAAGCAAAGAGAACACCCTTGTAAAAGACGGTGTAATCAACCTAACAGATGGAAGGGTGAGACAGGACATCTCCCTCCGCCTTGAAAACGTCGAGAGGGGCGTGCTGGAGATGGAGCTCGAATGCGTTCCTCTCACTCAATAG 1128 41.22 MLNLLLELDIAVSNVTSCAFYQPGTQKKLEELLKQSGNNLCADCGSPNPKWVSFNFGTFICIKCSGVHRSLGVHITKVLSVKLDEWSDEQVDSLINKGGNTTVNKKYEACIPDSQKKPKPESSIEERCDFIRNKYELLKFLSQEDQPKSHKRNSSSSQVSVSNNSTQEKKQYEKQATKHRIGNAFRNSWGRKDSEYKISKKTNSLVASNSMAGMVEFVGLIKVNVVRGTNLAVRDVITSDPYVILTLGHQSVKTRVIKSNLNPVWNESLMLSIPEHIPPLKILVYDKDTFSTDDFMGDAEIDIQPLLTAAKACETSTIHESIQLGKWIASKENTLVKDGVINLTDGRVRQDISLRLENVERGVLEMELECVPLTQ 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3150773 3153543 + Bda027179.1 Bda14g00438 20489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00438 375 CDD C2_ArfGAP 218 362 - -
Bda14g00438 375 PRINTS HIV Rev interacting protein signature 57 74 IPR001164 GO:0005096
Bda14g00438 375 PRINTS HIV Rev interacting protein signature 78 99 IPR001164 GO:0005096
Bda14g00438 375 PRINTS HIV Rev interacting protein signature 38 57 IPR001164 GO:0005096
Bda14g00438 375 ProSiteProfiles C2 domain profile. 201 316 IPR000008 -
Bda14g00438 375 Gene3D C2 domain 218 372 IPR035892 -
Bda14g00438 375 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 216 313 IPR035892 -
Bda14g00438 375 Pfam C2 domain 220 312 IPR000008 -
Bda14g00438 375 ProSiteProfiles ARF GTPase-activating proteins domain profile. 26 148 IPR001164 GO:0005096
Bda14g00438 375 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 23 375 IPR044518 GO:0005096|GO:0005543
Bda14g00438 375 SMART arf_gap_3 26 145 IPR001164 GO:0005096
Bda14g00438 375 Gene3D Arf GTPase activating protein 14 150 IPR038508 -
Bda14g00438 375 CDD ArfGap 29 135 - -
Bda14g00438 375 SUPERFAMILY ArfGap/RecO-like zinc finger 26 141 IPR037278 -
Bda14g00438 375 SMART C2_3c 220 315 IPR000008 -
Bda14g00438 375 MobiDBLite consensus disorder prediction 143 177 - -
Bda14g00438 375 Pfam Putative GTPase activating protein for Arf 27 142 IPR001164 GO:0005096
Bda14g00438 375 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD11-RELATED 23 375 - -
Bda14g00438 375 MobiDBLite consensus disorder prediction 152 170 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01192 Bda-Chr9:42845842 Bda14g00438 Bda-Chr14:3150773 2.83E-115 dispersed
Bda13g00516 Bda-Chr13:6196309 Bda14g00438 Bda-Chr14:3150773 1.25E-18 dispersed
Bda14g00438 Bda-Chr14:3150773 Bda13g01800 Bda-Chr13:41824189 3.11E-40 dispersed
Bda14g00438 Bda-Chr14:3150773 Bda02g00475 Bda-Chr2:45647532 1.78E-119 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00438 K12486 - csv:101221541 548.125