Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00441 ATGGGTCTGTCTGCAAAAGATGAGTTCCATGTCCTGGCTGTAGATGACAGCCCCATTGATAGAATGTTGATCGAAAGAATCCTTCAAACCTCTTCTTATCAAGGTATCTTCTTAGTTCTTCTTTCATACATGCTTACCCAGTTATTTTTACAGAGAATGATGATATTCATCGCTGCATTTTTGCTCCGACAGGATATTAAAGTGAACATGGTGATTACAGATTACTGCATGCCTGGAATGACCGGTTATGATCTCCTTAGACAAATCAAGGAATCCAAAACAATGAAAGACATACCAGTCGTGATCATGTCGTCGGAAAATAATACTTCAAGAATCAGCCGATGCTTGGAAGAAGGAGCAGAAGAGTTTCTGCTGAAGCCGGTGAAAAAGCCCGACGTTGAAAAGCTCATATCCCATTTGCAGAGGGGAAAAGACCGGCAGAAGTAA 447 41.39 MGLSAKDEFHVLAVDDSPIDRMLIERILQTSSYQGIFLVLLSYMLTQLFLQRMMIFIAAFLLRQDIKVNMVITDYCMPGMTGYDLLRQIKESKTMKDIPVVIMSSENNTSRISRCLEEGAEEFLLKPVKKPDVEKLISHLQRGKDRQK 148
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3161064 3161948 - Bda027182.1 Bda14g00441 20492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00441 148 SMART REC_2 9 137 IPR001789 GO:0000160
Bda14g00441 148 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 147 IPR045279 GO:0009736
Bda14g00441 148 Pfam Response regulator receiver domain 11 137 IPR001789 GO:0000160
Bda14g00441 148 Gene3D - 10 148 - -
Bda14g00441 148 ProSiteProfiles Response regulatory domain profile. 10 141 IPR001789 GO:0000160
Bda14g00441 148 SUPERFAMILY CheY-like 8 143 IPR011006 -
Bda14g00441 148 PANTHER RESPONSE REGULATOR RECEIVER DOMAIN PROTEIN 5 147 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00441 Bda-Chr14:3161064 Bda14g00828 Bda-Chr14:6372462 1.69E-27 dispersed
Bda14g00441 Bda-Chr14:3161064 Bda15g00091 Bda-Chr15:3136179 2.02E-55 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17017 PF00072 Response_reg 3.30E-19 CL0304 Bda TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00441 K14492 - vvi:100253216 162.155