Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00447 ATGTTTCAAGGGGATGGATCATCATCTTCATCAGTGACAGCACCAACTCTACTCTTCCCATGGACCTTATCTCCAGGGATAGGATCACCATACCCGTTTCTGAGAGAGCTCAAATCAGAAGAAAGAGGCCTGTGTCTGATTCATCTTCTCCTCGCCTGTGCTAGCCATGTTGCGGCTGGCCATATGGAATATGCAAATATTGGGCTTGAGCATATTTCACAACTTGCCTCTCCTGACGGTGACACTATGCAGCGAATTGCCGCTTATTTCACGGAAGCACTTGCCGATCGAGTTCTCAAAGCTTGGCCTGGTTTACACAAAGCTCTGAATTCGACCAAAATATCTTCAGTTTCAGAGCAAATCTTTGTCCAAAGACTCTTCTTTGAAATCTGCCCCTTCTTCAAGCTTGCATATCTGATCACAAACCAGGCGATTGTAGAAGCAATGAAAGGAGAAAAGATGATTCATATTATCGATTTTAATTCTTTTGAGCCCGCCCAGTGGATTAATCTCCTTCAGACATTGAAGGAGCGGCCCGAAGGGCCACCCCATGTGAGAATTACTGGGATTCATGAGCAGAAAGAAGTGCTGGAACAAATGGCTATTCGGTTGAACGACGAAGCCGAAAAATTAGACATTCCCTTTCAGTTCATTTCAATAGTGAGCAGATTAGAAAACCTAGATTTCGAAAGTTTGCGTGTGAAGACTGGCGAAGCACTTGCAGTCAGCTCTGTTCTAGAGCTTCACTCCCTTTTGGCCAATGACGACGAGAGAAAAAGCTCACCATCGACTTCCACCAATATTCAGAAAATTTTACACGTTAAACAGCGAACTTTGGGAGAGTGGTTCGAGACAGACTCGATGCCGCTTTTCAGCAGTCCCGATTCGGCATCCACATCTTCCCCATTGTCGCTGAGTCCTTCGCAGAAGATGGGAAGTTTCCTAAACGCACTCTGGGGACTTTCGCCAAAAATAATGGTAATAACCGAGCAAGAATCTAACCTCAATGGTTGTACTTTTATGGAGAGGGTCAGGGAAGCTTTAAACTTCTATGCAGCTTTGTTCGATTGCTTGGAATCGACGGTCTCTAGATCATCGCTGGAGAGACAGAAGGTCGAGAAGATGCTATTTGGAGAACAAATCAAGAATATCATTGCATGTGAGGGAGCTGAGAGGAAAGAAAGGCATGAGAAGCTCGAGAAATGGATTTTACGGCTTGAAGTTGCAGGGTTCGGAAGGGTGCCCTTAAGCTACCATGGTAGGTTGCTGGCCGGTAAGCTGTTGCAGAACTACGGCTATGACGGGTATAAGATTAAGGAAGAGAATGGATATTTGTTTATATGTTGGCAGGATAGGCCGCTCTTCTCGGTCTCGGCATGGAGCCTTCGGAGGAATGACTGA 1401 45.61 MFQGDGSSSSSVTAPTLLFPWTLSPGIGSPYPFLRELKSEERGLCLIHLLLACASHVAAGHMEYANIGLEHISQLASPDGDTMQRIAAYFTEALADRVLKAWPGLHKALNSTKISSVSEQIFVQRLFFEICPFFKLAYLITNQAIVEAMKGEKMIHIIDFNSFEPAQWINLLQTLKERPEGPPHVRITGIHEQKEVLEQMAIRLNDEAEKLDIPFQFISIVSRLENLDFESLRVKTGEALAVSSVLELHSLLANDDERKSSPSTSTNIQKILHVKQRTLGEWFETDSMPLFSSPDSASTSSPLSLSPSQKMGSFLNALWGLSPKIMVITEQESNLNGCTFMERVREALNFYAALFDCLESTVSRSSLERQKVEKMLFGEQIKNIIACEGAERKERHEKLEKWILRLEVAGFGRVPLSYHGRLLAGKLLQNYGYDGYKIKEENGYLFICWQDRPLFSVSAWSLRRND 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3218135 3219535 - Bda027188.1 Bda14g00447 20498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00447 466 Pfam GRAS domain family 46 460 IPR005202 -
Bda14g00447 466 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 463 IPR005202 -
Bda14g00447 466 PANTHER TRANSCRIPTION FACTOR GRAS, SCARECROW-LIKE PROTEIN 3-RELATED 1 463 - -
Bda14g00447 466 ProSiteProfiles GRAS family profile. 37 461 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00753 Bda-Chr7:8960640 Bda14g00447 Bda-Chr14:3218135 0 dispersed
Bda14g00447 Bda-Chr14:3218135 Bda07g01379 Bda-Chr7:16636008 8.63E-70 dispersed
Bda14g00447 Bda-Chr14:3218135 Bda01g01823 Bda-Chr1:54372487 4.48E-72 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17019 PF03514 GRAS 8.30E-135 CL0063 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00447 - - cmo:103489486 743.421