Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00488 ATGTCTAATTCGGAAGGTGGTAATAACGGCGTCGTCAACGGCGCTTTAATTGACCCTCAGAGGCAACAGCCGCCGGCGAATGGAGCGCTTGTTGTCAAAAAGCCGCCCTCTAAAGACCGCCACAGTAAGGTCGACGGTCGAGGTCGCCGTATTCGGATGCCGATCATTTGCGCCGCCCGTGTGTTTCAGCTCACTAGAGAGCTTGGACACAAGTCCGATGGTCAGACCATCGAGTGGCTTCTAAGGCAAGCTGAGCCTTCGATCATAGCAGCGACGGGAACTGGTACTACTCCTGCCAGCTTCTCTTCAGTTTCCGTATCCGTCAGAGGCGGCGGCGTCGGTTCGAGTTCGCTCTCTACCTCTTCCACTACGTCCTCTCTATCCCTTTCTCGGCCCCAGGCCTTCTCCGGACCCACCCCCTTTATTCTCGGTAAGCGTGTAAGAACCGACGACGACGGAGGAGCTGGAGCTAAGGACGAAGTTTTATCCGTCGGTCCCACAATGGGCTCCATAGTGGGTCCCTCCGCCGCCGGTGGATACTGGGCCATTCCGGCAAGGCCGGACTTTGGTCAGATTTGGAGCTTTGCTACGGGGACGGCAGCGCCGGAATTGATTCACCCTTCCGCGGTGACTCAGCAGGGTTCTCTATTTGTTCAGCAGCAACAGGCGATTGGAGAGGCTTCGGCGGCACGGGTGGGGAATTACCTTCCGGGACATTTGAATTTACTGGCTTCGTTATCAGGTGGAACCGGCAATTCTGGTCGGAGAGAAGATGACCAACGCTAA 786 56.49 MSNSEGGNNGVVNGALIDPQRQQPPANGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSVSVRGGGVGSSSLSTSSTTSSLSLSRPQAFSGPTPFILGKRVRTDDDGGAGAKDEVLSVGPTMGSIVGPSAAGGYWAIPARPDFGQIWSFATGTAAPELIHPSAVTQQGSLFVQQQQAIGEASAARVGNYLPGHLNLLASLSGGTGNSGRREDDQR 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3543917 3544702 - Bda027232.1 Bda14g00488 20539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00488 261 MobiDBLite consensus disorder prediction 34 49 - -
Bda14g00488 261 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 258 IPR005333 GO:0003700
Bda14g00488 261 Pfam TCP family transcription factor 37 121 IPR017887 -
Bda14g00488 261 MobiDBLite consensus disorder prediction 112 132 - -
Bda14g00488 261 ProSiteProfiles TCP domain profile. 37 91 IPR017887 -
Bda14g00488 261 MobiDBLite consensus disorder prediction 1 49 - -
Bda14g00488 261 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 258 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00488 Bda-Chr14:3543917 Bda15g00079 Bda-Chr15:2766786 5.67E-150 dispersed
Bda14g00488 Bda-Chr14:3543917 Bda14g00462 Bda-Chr14:3323927 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17025 PF03634 TCP 2.40E-32 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00488 K16221 - csv:101206050 341.658