Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00528 ATGGGAGAGGTTGATCCAGCTTTCATCCAAGCCCCAGAACACAGGCCCAAGCTCTCCGCCATTGAAGCGGAAGGAATTCCTCTGATCGATCTCTCCCCTCTGTTTTCTTCTCCGAACTCAGACTCCAACTGGAAAGTTTCGCCGTTAGCCGAGCTGGTCGAGGAAATCGGCAATGCTTGCGAGAAATGGGGGTTCTTCCAAGTGATCAACCATGGCGTTGCTTCAGAAAAGCGACAGAAGGCTGAGAGCGCTGCGAGGAGATTTTTCGCACAGGATTTGGAGGAGAAGAGGAAGGTTCGGAGAGACGACGAGAGGGTTTTGGGTTTTTACGAGAAGGAGCATACAAAAAATGTGAGAGACTGGAAGGAGGTGTTCGATTTTACTGTGTTGGAGCCCACCATTGTTCCTGCTTCGCCTGATCTTGACGATGGCGAGTTGACTCAGTGGATCAATCAATGGCCCTCTTATCCACCGGAATTGAGGAAAGCTTGTGAGGAATATGCTGGAGAAGTGGAAATATTAGGCTTCAAGTTGATGGAACTTATTTCCCTGAGCTTAGGCTTGGAAGCAAAAGCCTTGCATACTTTCTTCAAAGATCAAACCAGTTTTGTAAGACTAAACCGCTATCCTCCATGCCCTACTCCTCATCTAGCCCTCGGTGTTGGTCGACACAAAGATGGCGGTGCCTTGACAATCCTCGCTCAAGACAATGTTGGAGGATTGGAAGTGAAGCGAAAATCGGATGAGGAATGGATTCTCGTCAGACCAACACCGAATGCTTACATAATCAATGTTGGAGACATTATTCAGGTTTGGAGCAACGAGAAGTATGAGAGTGTGGAGCACAGAGTTATGGTGAATTCAGAGAAGGAAAGGTTTTCCATCCCCTTCTTCTTCAACCCTTCCCATTACACTGTGGTGAAGCCATTGGAGGAGCTCATATCTGACCAAAACCCTTCCAAATACAAACCCTACAGCTGGGGCAAGTTCATAACAACCAGAAAGCGCAGCAACTTTCAGAAACTCAATGTTGAGAATATCCAAATCAGCCATTTCAGAATCCCAAGCTAA 1071 47.15 MGEVDPAFIQAPEHRPKLSAIEAEGIPLIDLSPLFSSPNSDSNWKVSPLAELVEEIGNACEKWGFFQVINHGVASEKRQKAESAARRFFAQDLEEKRKVRRDDERVLGFYEKEHTKNVRDWKEVFDFTVLEPTIVPASPDLDDGELTQWINQWPSYPPELRKACEEYAGEVEILGFKLMELISLSLGLEAKALHTFFKDQTSFVRLNRYPPCPTPHLALGVGRHKDGGALTILAQDNVGGLEVKRKSDEEWILVRPTPNAYIINVGDIIQVWSNEKYESVEHRVMVNSEKERFSIPFFFNPSHYTVVKPLEELISDQNPSKYKPYSWGKFITTRKRSNFQKLNVENIQISHFRIPS 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3816920 3818895 - Bda027274.1 Bda14g00528 20579

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00528 356 Gene3D - 1 341 IPR027443 -
Bda14g00528 356 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE, NON-HEME DIOXYGENASE DOMAIN-CONTAINING PROTEIN-RELATED 2 346 - -
Bda14g00528 356 SUPERFAMILY Clavaminate synthase-like 3 340 - -
Bda14g00528 356 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 2 346 - -
Bda14g00528 356 Pfam 2OG-Fe(II) oxygenase superfamily 204 301 IPR044861 -
Bda14g00528 356 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 200 301 IPR005123 -
Bda14g00528 356 Pfam non-haem dioxygenase in morphine synthesis N-terminal 26 155 IPR026992 -
Bda14g00528 356 PRINTS Isopenicillin N synthase signature 56 73 - -
Bda14g00528 356 PRINTS Isopenicillin N synthase signature 224 245 - -
Bda14g00528 356 PRINTS Isopenicillin N synthase signature 289 307 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00528 - - - qsu:112029575 553.132
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01086 Bda-Chr11:10615139 Bda14g00528 Bda-Chr14:3816920 3.07E-32 dispersed
Bda13g00348 Bda-Chr13:4359538 Bda14g00528 Bda-Chr14:3816920 2.54E-36 dispersed
Bda14g00528 Bda-Chr14:3816920 Bda03g00820 Bda-Chr3:6960904 1.02E-63 dispersed
Bda14g00847 Bda-Chr14:6528113 Bda14g00528 Bda-Chr14:3816920 8.34E-45 dispersed
Bda14g01090 Bda-Chr14:9665962 Bda14g00528 Bda-Chr14:3816920 1.53E-36 dispersed
Bda14g01237 Bda-Chr14:12709464 Bda14g00528 Bda-Chr14:3816920 1.82E-39 dispersed
Bda14g00528 Bda-Chr14:3816920 Bda14g00529 Bda-Chr14:3819848 4.73E-147 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g477 . . . . . . . . Cmo19g00644 . . . . . . . Cpe15g00508 Bhi05g01158 . . . Hepe06g0397 . . . . . . . . . . . . . . Csa07g00790 . . . . . Bda14g00528 . . . . . . . Cma11g01775 Cma19g00626 . Car19g00478 . . . . . . . . . . . . . . . . Lsi11g01036 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000982 2 2 0 0 1 2 2 2 3 3 2 2 3 2 3 3 2 4 3 3 4 2 3 1 3 4 5 3 3 12 84
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda14g00528 Bda_Chr14 FPKM 378.163452 395.398224 215.68602 214.544235 338.103851 370.317505 327.865387 156.303391 147.714981