Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00529 ATGGTCAGTGTTTCTTCACTGGGAATCTCGGCGATGGGAGAGCTACTCGTCGATTCCGCTTTCATCCAACCCGAAGCCCATCGCCCGAAGCTCAATCCCATCCAGCACGTCGACGGGATCCCTCTCATTGACCTATCCATCTCCGATTCCAAGGGATTCGAGCAACTCGTGTCTGAGATCAGCTCCGCCAGTGAAAACTGGGGATTTTTCCAAGTAATCAATCACGGAGTACCGTCGGAGCTGCGTTCAAAAGTCGAGATCGTTGCGAGGCGATTTTTCTGCCAGGCGACGGAGGAGAAGAGGAAGGTGAAGCGGGACGAGGTTAATGCGATGGGGTACCACGACAGCGAGCATACGAAAAACGTGAGGGACTGGAAGGAGGTTTTTGATTTCTTGGTGGAGGATCCGACGCTGGTTCCGGCTTCTGTCGATGCTAACGACGAGGAATTAAGGATGCTGACTAATCAATGGCCTCAACATCCTCCTGAATTCAGACAGACATGCGAGGAATACGCAAAAGAGCTTGAAAAACTAGCACTCAGGCTATTAGAACTCCTTTCTCTTGGCTTGGGTTTGCCGGCTGACAAATTAAAGGCCAATTTCAGAAATCAAACAAGCATGGCAAGGCTCAATTACTATCCCTCCTGCCCTTTCCCGCACTTAGCTCTCGGGGTCGGCCGGCACAAAGACGCCGGGGTATTGACCGTACTTGCGCAAGACGAAGTCGGCGGCTTGGAAGTTAAACGTATTTCCGACGGAGAATGGGTGGCCGTTAAACCGATCCAAGATGCATATATCGTCAATATCGGTGATATTTTTCAAGTATGGTGCAACGACAGGTACCAGAGCGTGGAGCATAGAGTGAGGGTGAACAGGGAGAAGGGAAGGTTTTCCATGCCTTTCTTCTTGCTGCCTTCCCACGATGTTATGGTGAAGCCATTGGAGGAGCTTCTGTGCAACCAAAACCCGTCCAAGTACAAGGAGTACAGTTGGGGCAAGTTCTTAGCGGCTCGGCACCGGAGTGATTTCAAGAAACAAGATGTCGAAAACATTCAAGTTCATCGTTTCAAGTTGCCGGGGTGA 1083 50.69 MVSVSSLGISAMGELLVDSAFIQPEAHRPKLNPIQHVDGIPLIDLSISDSKGFEQLVSEISSASENWGFFQVINHGVPSELRSKVEIVARRFFCQATEEKRKVKRDEVNAMGYHDSEHTKNVRDWKEVFDFLVEDPTLVPASVDANDEELRMLTNQWPQHPPEFRQTCEEYAKELEKLALRLLELLSLGLGLPADKLKANFRNQTSMARLNYYPSCPFPHLALGVGRHKDAGVLTVLAQDEVGGLEVKRISDGEWVAVKPIQDAYIVNIGDIFQVWCNDRYQSVEHRVRVNREKGRFSMPFFLLPSHDVMVKPLEELLCNQNPSKYKEYSWGKFLAARHRSDFKKQDVENIQVHRFKLPG 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3819848 3821008 - Bda027275.1 Bda14g00529 20580

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00529 360 PANTHER DIRIGENT PROTEIN 17 350 - -
Bda14g00529 360 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 204 305 IPR005123 -
Bda14g00529 360 Coils Coil 168 188 - -
Bda14g00529 360 PRINTS Isopenicillin N synthase signature 293 311 - -
Bda14g00529 360 PRINTS Isopenicillin N synthase signature 60 77 - -
Bda14g00529 360 PRINTS Isopenicillin N synthase signature 228 249 - -
Bda14g00529 360 Pfam non-haem dioxygenase in morphine synthesis N-terminal 40 159 IPR026992 -
Bda14g00529 360 Gene3D - 4 345 IPR027443 -
Bda14g00529 360 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 17 350 - -
Bda14g00529 360 SUPERFAMILY Clavaminate synthase-like 17 342 - -
Bda14g00529 360 Pfam 2OG-Fe(II) oxygenase superfamily 206 303 IPR044861 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00529 - - - tcc:18607869 463.766
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00529 Bda-Chr14:3819848 Bda07g01960 Bda-Chr7:36967623 1.84E-59 dispersed
Bda14g00528 Bda-Chr14:3816920 Bda14g00529 Bda-Chr14:3819848 4.73E-147 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g481 . . . . . . . . Cmo19g00645 . . . . . . . Cpe15g00509 Bhi05g01160 . . . . . . . . . . . . . . . . . . . . . . . . Bda14g00529 . . . . . . . . Cma19g00627 . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000982 2 2 0 0 1 2 2 2 3 3 2 2 3 2 3 3 2 4 3 3 4 2 3 1 3 4 5 3 3 12 84
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda14g00529 Bda_Chr14 FPKM 20.934956 20.001579 0.518445 0.343687 1.328433 1.586252 1.661966 0.457432 0.401591