Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00572 ATGCCTATGGCGGCCACTCCTTCTTCTACTGATGATGCTCCGCTTTCATCCGAAGGTGGCGAGGGCTACGACATGGATGAGGACCACCCCACATTTGTTTGGGGGACGAATATAAGCGTCGATGATGTTAAAGGGGCGATTATTCGCTTCTTGAAACATTTCCGGGATTCCAGAGCTTCACAATCGGAAGGAGAATTTATTACCGAAGGGAAGTATACGGAGGCAATCAAACGGGTTCTTGAGATTGAAGGAGATTCTCTGGATGTTGATGCCCGTGATGTATTTGACTATGATTCCGATTTGTATACTAAGATGGTGAGGTACCCCCTTGAAGTTCTGGCAATTTTTGATATTGTTTTGATGGAAATGGTCCCCCAAATTAACCCTCTATTTGAGAAGCACATTCAAACACGGATTTACAATCTCAAAACCTCTACTTCAATGAGAAATCTCAACCCATCTGACATTGAGAGGATGGTATCACTGAAAGGAATGATTATTCGGTGTAGTTCCATAATACCTGAGATTAGAGAAGGGATGTTTAGGTGTCTTGTCTGTGGGTACTACTCGGACCCCATTGCAATAGAGAGAGGACGAATCACTGAGCCAACTGTTTGCTCGAAAGAAGAGTGCCAAGCAAAAAATTCCATGACTCTAGTTCACAATCGATGCAGATTCGCTGACAAGCAGATTGTGAGGCTTCAGGAGACTCCTGATGAGATTCCAGAAGGGGGCACGCCACACACTGTGAGCTTGTTGATGCATGACAAGCTGGTTGATTCTGGAAAGCCAGGTGACAGAGTTGAGGTTACTGGGATTTACCGGGCGATGACTGTGAGAGTTGGACCTACACAGAGAACCGTGAAGTCATTATTTAAGGCGTATTGTCTTCACGTAAAGAAAGCTGATAAGTCAAGAATGCAAGTGGAGGATCTTATGGAAGTAGAAAATCGATTGGGCTCGAATTTGGATGATCTCTCTTTTGATGAAGCGACTGTGAAGAAGTTGAAAGATCTATCAAAATTACCTGACACATACAATAGACTAACCAGATCGTTGGCACCAAACATTTGGGAGCTAGATGATGTTAAGAAAGGTCTCCTTTGCCAGCTTTTTGGTGGCAATGCTTTAAAGTTGCCATCTGGTGCTAGTTTCCGTGGAGATATAAACGTACTTCTTGTTGGTGATCCTGGAACTAGCAAGTCTCAGCTACTCCAATACATACACAAGCTATCTCCTCGAGGTATTTACACAAGTGGAAGGGGGAGTTCTGCTGTTGGTTTAACCGCTTATGTTACTAAAGATCCAGAAACAGGGGAAACAGTTCTGGAGAGTGGAGCATTGGTCTTGAGTGACAGAGGTATCTGCTGTATTGATGAATTTGATAAAATGTCTGATAATGCAAGGAGCATGTTACATGAGGTTATGGAACAGCAAACGGTTTCTATAGCCAAGGCAGGAATCATTGCCTCTCTTAATGCAAGGACCTCAGTGTTGGCTTGTGCAAATCCAAGTGGTTCACGTTACAATCCTCGTTTGTCTGTGATTGACAACATACACCTTCCTCCAACTTTATTTGTGTGGTTTTCTCACAGGTTTGACTTGATTTACTTAATTCTTGACAAAGCTGATGAGGATACAGATAGGCGCCTTGCGAAGCACATTGTTTCATTACACTTTGAGAATCCCGAGATTTCAGAGCAAGATTTCTTGGATCTTCATACACTAACTGCATATGTGAGTTACGCTCGAAAGCATGTTCAGCCACAATTATCAGATGAGGCTGCCGAAGAATTAACTCGAGGTTATGTAGAGTTGAGAAGGAGAGGAAATTTCCCAGGCAGTAGTAAAAAGGTTATAACAGCTACTCCCAGGCAGATTGAAAGTTTAATACGCCTCAGTGAAGCCCTTGCCCGGATTCGATTGTCGGAGTGGGTTAGAACAATTGATATGGATCTAATAACAACTGGAGTTTCAGCTAGTGAAAGAATGAAACGAGAAAGTGTGCTCTTATCAACCCGCAATATTATTATGGATAAGATGCAGCTTGGAGGCCCCTCCATGCGATTACTGGAGTTGCTAGAGGAGCTAAAGAAGCAGAGCTTTAGTAGTGAAGTCCACCTCAATGATCTGAGGACTGCGGTGGCAACTCTAGCAAGCGAGGGATTTGTAGGAATCCAAGGTGATACCATAAAAAGGATACTCAATTTAGAGAAGAGTCCATTTCAGCGAACTTATGCTGCTCAGATTAAGAAGTGTGGAGAGATGGCGCGCAAATTGCGTTTTTTCAAGGAGCAGATGTCAAAGGCTGGATTAGTTTCAAAAGGGTTTATAACAAAAGCTGATATCAATGTGGATGACCTAGAGGTCAAACTTAGTGAACTTGAGGCAGAATTGGCTGAAATAAATGCAAATGGCGAGAAGTTACAGCGTTCATACAGTGAACTTATAGAATACAAATTTGTTCTGCAGAAGGCTGGTGAGTTTTTCCAGTTAGCACAAAGCAGTGCCTTAGAACAGCAGAGAGAATATGAATCACGTCATGTGGGTGAAGAATCCTTAGACACGCCATTATTGTTGGAACAAGATATGTCAGCTGATGCTTCAAAGCAAATCAAGTTGGGGTTTCTTGCTGGACTTGTGCCTAGGGAGAAATTTGTGGCTTTTGAGAGGATTTTGTTTCGTGCTACCCGGGGAAATGTATTTCTGAAGCAGGCTGGTGTTGAAGAACCTGTAATAGATCCTGTTTCTGGAGACAAGATTGAGAAAAATGTGTTCGTGATTTTCTACTCTGGAGAAAGAGCAAAGAACAAAGTTCTTAAAATATGTGAGGCTTTTGGAGCCAATCGGTATCCCTTCTCTGAAGAACTGGACAGACAAGCTCAAATGGTCACCGAGGTTTCAGGAAGGCTCTCTGAACTGAAAACAACCATAGATGTTGGACTGCTGCATCGAGGAAATTTGTTGCTGACCATCGGTGATCAAATTGAGCAATGGGACATTTTGGTGAGAAAGGAGAAGTCAATATACCATACATTGAACATGCTTAGCTTTGATGTGACAAAAAAGTGTTTAGTGGCTGAGGGATGGTGTCCAGTTTTTGCTACAAAACAGTATTCTGTTGTTTTTTTTTGCAGATCCAGGATGCATTGCAACGAGCAGCATTTGATTCCAATTCCCAAGTTGGGGCCATATTCCAGTGTGGCTAAGTATCAAGAAGCCAATCCTGGTGTATATACTGTTGTCACCTTCCCGTTTCTCTTTGCTGTTATGTTTGGTGACTGGGGACATGGAATATGTTTGTTACTGGCAGCAATGTATTTTATTATCAGGGAAAGGAAACTTTCCAATCAGAAGCTTGGTGACATCATGGAAATGACCTTTGGAGGGCGCTATGTTATTATGATGATGGCACTCTTCTCAATATATACAGGTCTAATCTATAATGAGTTCTTCTCTGTCCCATTTGAACTTTTTGGTCGCTCAGCTTATGCTTGTCGTGACCTCGACTGCAGGTATTCAACTAATATGTTGATTAAATACTCTACTCACATTAGAGACGCAACAACAATTGGATTGATAAAGGTGCGGCCCACCTACCCATTCGGCGTAGACCCTGTATGGCATGGTACTCGAAGTGAGCTGCCATTCCTCAACTCTTTGAAGATGAAAATGTCAATCCTTCTCGGGGTTGCCCAAATGAACCTTGGAATCATACTAAGCTATTTCAATGCAAAATTTTTCAGAAACGGCCTTAATATCTGGTACCAGTTTTTGCCACAGATGATATTTTTGAACTCTCTTTTTGGATACCTATCTCTCCTCATAATTTTCAAATGGTGCACTGGTTCACAAGCGGATTTGTACCATATTGTGCTTCTTTTACTGGCACTTGTAGCTGTACCATGGATGCTGCTTCCAAAACCTCTTATATTGAAGAAGCAACACCAGGAGAGGCATCACGGTGAATCTTATGAGCCATTACAGAGCGAAGACTTACTTCAATTAGAATCAAATCATAATGCTCATGGTCATGAGGAATTTGAGTTCAGTGAAGTTTTTGTGCATCAACTTATACATACAATAGAATTTGTACTTGGAGCAGTGTCAAATACCGCTTCCTACCTTCGTCTTTGGGCCCTAAGTCTTGCCCACTCAGAACTATCGAGTGTATTCTATGAGAAGGTTCTTCTTCTAGCTTGGGGGTTCAACAATGTAATCATCCTTGTAGTAGGCATCATTGTCTTTGTATGTGCCACCGTTGGCGTGTTACTAGTGATGGAAACCCTCAGTGCTTTTCTTCACGCGCTGCGTCTTCATTGGGTGGAATTTCAAAACAAATTTTACGAGGGAGATGGCTACAAATTCTATCCATTTTCATTTTCTTTGCTGGACGATGAAGCTGATTGA 4410 42.22 MPMAATPSSTDDAPLSSEGGEGYDMDEDHPTFVWGTNISVDDVKGAIIRFLKHFRDSRASQSEGEFITEGKYTEAIKRVLEIEGDSLDVDARDVFDYDSDLYTKMVRYPLEVLAIFDIVLMEMVPQINPLFEKHIQTRIYNLKTSTSMRNLNPSDIERMVSLKGMIIRCSSIIPEIREGMFRCLVCGYYSDPIAIERGRITEPTVCSKEECQAKNSMTLVHNRCRFADKQIVRLQETPDEIPEGGTPHTVSLLMHDKLVDSGKPGDRVEVTGIYRAMTVRVGPTQRTVKSLFKAYCLHVKKADKSRMQVEDLMEVENRLGSNLDDLSFDEATVKKLKDLSKLPDTYNRLTRSLAPNIWELDDVKKGLLCQLFGGNALKLPSGASFRGDINVLLVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGALVLSDRGICCIDEFDKMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLPPTLFVWFSHRFDLIYLILDKADEDTDRRLAKHIVSLHFENPEISEQDFLDLHTLTAYVSYARKHVQPQLSDEAAEELTRGYVELRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRLSEWVRTIDMDLITTGVSASERMKRESVLLSTRNIIMDKMQLGGPSMRLLELLEELKKQSFSSEVHLNDLRTAVATLASEGFVGIQGDTIKRILNLEKSPFQRTYAAQIKKCGEMARKLRFFKEQMSKAGLVSKGFITKADINVDDLEVKLSELEAELAEINANGEKLQRSYSELIEYKFVLQKAGEFFQLAQSSALEQQREYESRHVGEESLDTPLLLEQDMSADASKQIKLGFLAGLVPREKFVAFERILFRATRGNVFLKQAGVEEPVIDPVSGDKIEKNVFVIFYSGERAKNKVLKICEAFGANRYPFSEELDRQAQMVTEVSGRLSELKTTIDVGLLHRGNLLLTIGDQIEQWDILVRKEKSIYHTLNMLSFDVTKKCLVAEGWCPVFATKQYSVVFFCRSRMHCNEQHLIPIPKLGPYSSVAKYQEANPGVYTVVTFPFLFAVMFGDWGHGICLLLAAMYFIIRERKLSNQKLGDIMEMTFGGRYVIMMMALFSIYTGLIYNEFFSVPFELFGRSAYACRDLDCRYSTNMLIKYSTHIRDATTIGLIKVRPTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIILSYFNAKFFRNGLNIWYQFLPQMIFLNSLFGYLSLLIIFKWCTGSQADLYHIVLLLLALVAVPWMLLPKPLILKKQHQERHHGESYEPLQSEDLLQLESNHNAHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLLAWGFNNVIILVVGIIVFVCATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFYPFSFSLLDDEAD 1469
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 4347542 4371662 - Bda027323.2 Bda14g00572 20623
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00572 1469 ProSiteProfiles MCM family domain profile. 345 555 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bda14g00572 1469 Pfam MCM N-terminal domain 46 144 IPR027925 -
Bda14g00572 1469 Pfam MCM OB domain 148 277 IPR033762 -
Bda14g00572 1469 CDD MCM4 348 652 - -
Bda14g00572 1469 SUPERFAMILY Nucleic acid-binding proteins 66 294 IPR012340 -
Bda14g00572 1469 PANTHER VACUOLAR PROTON ATPASES 1291 1468 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bda14g00572 1469 PANTHER VACUOLAR PROTON ATPASES 1067 1293 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bda14g00572 1469 Coils Coil 778 812 - -
Bda14g00572 1469 ProSitePatterns MCM family signature. 454 462 IPR018525 GO:0003677|GO:0005524|GO:0006260
Bda14g00572 1469 Gene3D - 175 227 - -
Bda14g00572 1469 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 361 372 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bda14g00572 1469 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 221 233 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bda14g00572 1469 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 507 524 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bda14g00572 1469 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 170 183 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bda14g00572 1469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 356 652 IPR027417 -
Bda14g00572 1469 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 1291 1468 - -
Bda14g00572 1469 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 1067 1293 - -
Bda14g00572 1469 Pfam MCM AAA-lid domain 575 652 IPR041562 -
Bda14g00572 1469 Gene3D - 326 672 IPR027417 -
Bda14g00572 1469 Pfam MCM P-loop domain 333 559 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bda14g00572 1469 Gene3D - 148 287 IPR012340 -
Bda14g00572 1469 Gene3D - 37 142 - -
Bda14g00572 1469 MobiDBLite consensus disorder prediction 1 22 - -
Bda14g00572 1469 SMART mcm 144 659 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bda14g00572 1469 PRINTS Mini-chromosome maintenance (MCM) protein family signature 474 487 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bda14g00572 1469 PRINTS Mini-chromosome maintenance (MCM) protein family signature 498 510 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bda14g00572 1469 PRINTS Mini-chromosome maintenance (MCM) protein family signature 386 401 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bda14g00572 1469 PRINTS Mini-chromosome maintenance (MCM) protein family signature 446 460 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bda14g00572 1469 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 733 1039 - -
Bda14g00572 1469 PANTHER VACUOLAR PROTON ATPASES 733 1039 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bda14g00572 1469 Pfam V-type ATPase 116kDa subunit family 735 1038 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bda14g00572 1469 Pfam V-type ATPase 116kDa subunit family 1290 1461 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bda14g00572 1469 Pfam V-type ATPase 116kDa subunit family 1067 1285 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bda14g00572 Bda15g01074 BCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00085 Bda-Chr2:3920657 Bda14g00572 Bda-Chr14:4347542 5.84E-16 transposed
Bda03g01734 Bda-Chr3:56776528 Bda14g00572 Bda-Chr14:4347542 8.87E-09 transposed
Bda05g00009 Bda-Chr5:616526 Bda14g00572 Bda-Chr14:4347542 1.26E-65 transposed
Bda09g00338 Bda-Chr9:4340736 Bda14g00572 Bda-Chr14:4347542 2.39E-92 transposed
Bda09g00764 Bda-Chr9:13933455 Bda14g00572 Bda-Chr14:4347542 7.32E-107 transposed
Bda10g00656 Bda-Chr10:40734099 Bda14g00572 Bda-Chr14:4347542 8.39E-96 transposed
Bda14g00572 Bda-Chr14:4347542 Bda15g01074 Bda-Chr15:19977149 0 wgd
Bda14g00572 Bda-Chr14:4347542 Bda08g01248 Bda-Chr8:50997590 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00572 K02212 - csv:101211850 1247.26