Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00574 ATGAAGATCCGATGCGACGTTTGTGAGAAAGTGGAGGCCTCAGTCTTCTGCACGGCCGATGAAGCCGCTCTCTGCAATGGCTGCGACCGCCATATCCACCATGCAAACAAGCTCGCCAGCCAGCACAAACGTTTCTCTCTCCTCCACCCCACCTTCAAACAATCCCCTCTCTGCGACATCTGTCAGGAAAAGAGAGCTTTTGTTTTCTGTAAAGAAGACAGATCAGTTCTTTGCAGAGAATGCGATGTTTCAACCCACAAAGCCAACGAACACACCAAAAAGCACAATAGATTTCTTCTTACGGGAGTAAAGCTTTCTTCCTCATCTTCTTTCTACCCAACAACGTCAACCTGTTATCCGGCCATTGATGCTCAAACTGGAAGCTTCGAAACGCAAGCTAAACGACCCAAAACAAACTTCAGCGAAAGTCATAATGCTGGGCCGGTTGGTGAGGGTTGCTCGTATTCAGCAAGCAGCATATCGGAGTACTTAACGGAGACTTTGCCTGGATGGTGCGTCGAGGATCTCCTCGATCCCTCAAGCTTTGCCAATGGCTTCTGTAAGGTTTGCAGCACATCCAAATTAATTTTTTATTTTTTGTAG 603 47.26 MKIRCDVCEKVEASVFCTADEAALCNGCDRHIHHANKLASQHKRFSLLHPTFKQSPLCDICQEKRAFVFCKEDRSVLCRECDVSTHKANEHTKKHNRFLLTGVKLSSSSSFYPTTSTCYPAIDAQTGSFETQAKRPKTNFSESHNAGPVGEGCSYSASSISEYLTETLPGWCVEDLLDPSSFANGFCKVCSTSKLIFYFL 200
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 4384124 4384827 + Bda027325.1 Bda14g00574 20625
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00574 200 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 192 - -
Bda14g00574 200 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Bda14g00574 200 Pfam B-box zinc finger 54 93 IPR000315 GO:0008270
Bda14g00574 200 Pfam B-box zinc finger 3 44 IPR000315 GO:0008270
Bda14g00574 200 Gene3D Classic Zinc Finger 1 96 - -
Bda14g00574 200 PANTHER B-BOX ZINC FINGER PROTEIN 20 1 192 - -
Bda14g00574 200 CDD Bbox1_BBX-like 57 100 - -
Bda14g00574 200 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bda14g00574 200 SMART bboxneu5 53 100 IPR000315 GO:0008270
Bda14g00574 200 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bda14g00574 200 CDD Bbox1_BBX-like 5 47 - -
       

Event-related genes


       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01843 Bda-Chr11:53635914 Bda14g00574 Bda-Chr14:4384124 4.40E-22 dispersed
Bda14g00574 Bda-Chr14:4384124 Bda14g00989 Bda-Chr14:8030086 2.77E-23 dispersed
Bda05g00809 Bda-Chr5:56536770 Bda14g00574 Bda-Chr14:4384124 4.78E-40 transposed
Bda01g01521 Bda-Chr1:51110063 Bda14g00574 Bda-Chr14:4384124 2.19E-65 wgd
Bda01g00506 Bda-Chr1:32057229 Bda14g00574 Bda-Chr14:4384124 8.38E-66 wgd
Bda14g00574 Bda-Chr14:4384124 Bda06g00954 Bda-Chr6:26410287 1.32E-85 wgd
Bda14g00574 Bda-Chr14:4384124 Bda08g00955 Bda-Chr8:18590465 3.43E-85 wgd
Bda14g00574 Bda-Chr14:4384124 Bda08g01236 Bda-Chr8:50639497 8.68E-62 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17034 PF00643 zf-B_box 1.10E-07 No_clan Bda TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00574 - - mnt:21391799 253.062