Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda14g00574 | ATGAAGATCCGATGCGACGTTTGTGAGAAAGTGGAGGCCTCAGTCTTCTGCACGGCCGATGAAGCCGCTCTCTGCAATGGCTGCGACCGCCATATCCACCATGCAAACAAGCTCGCCAGCCAGCACAAACGTTTCTCTCTCCTCCACCCCACCTTCAAACAATCCCCTCTCTGCGACATCTGTCAGGAAAAGAGAGCTTTTGTTTTCTGTAAAGAAGACAGATCAGTTCTTTGCAGAGAATGCGATGTTTCAACCCACAAAGCCAACGAACACACCAAAAAGCACAATAGATTTCTTCTTACGGGAGTAAAGCTTTCTTCCTCATCTTCTTTCTACCCAACAACGTCAACCTGTTATCCGGCCATTGATGCTCAAACTGGAAGCTTCGAAACGCAAGCTAAACGACCCAAAACAAACTTCAGCGAAAGTCATAATGCTGGGCCGGTTGGTGAGGGTTGCTCGTATTCAGCAAGCAGCATATCGGAGTACTTAACGGAGACTTTGCCTGGATGGTGCGTCGAGGATCTCCTCGATCCCTCAAGCTTTGCCAATGGCTTCTGTAAGGTTTGCAGCACATCCAAATTAATTTTTTATTTTTTGTAG | 603 | 47.26 | MKIRCDVCEKVEASVFCTADEAALCNGCDRHIHHANKLASQHKRFSLLHPTFKQSPLCDICQEKRAFVFCKEDRSVLCRECDVSTHKANEHTKKHNRFLLTGVKLSSSSSFYPTTSTCYPAIDAQTGSFETQAKRPKTNFSESHNAGPVGEGCSYSASSISEYLTETLPGWCVEDLLDPSSFANGFCKVCSTSKLIFYFL | 200 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 4384124 | 4384827 | + | Bda027325.1 | Bda14g00574 | 20625 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda14g00574 | 200 | PANTHER | B-BOX ZINC FINGER PROTEIN 22 | 1 | 192 | - | - | |
| Bda14g00574 | 200 | ProSiteProfiles | Zinc finger B-box type profile. | 53 | 100 | IPR000315 | GO:0008270 | |
| Bda14g00574 | 200 | Pfam | B-box zinc finger | 54 | 93 | IPR000315 | GO:0008270 | |
| Bda14g00574 | 200 | Pfam | B-box zinc finger | 3 | 44 | IPR000315 | GO:0008270 | |
| Bda14g00574 | 200 | Gene3D | Classic Zinc Finger | 1 | 96 | - | - | |
| Bda14g00574 | 200 | PANTHER | B-BOX ZINC FINGER PROTEIN 20 | 1 | 192 | - | - | |
| Bda14g00574 | 200 | CDD | Bbox1_BBX-like | 57 | 100 | - | - | |
| Bda14g00574 | 200 | ProSiteProfiles | Zinc finger B-box type profile. | 1 | 47 | IPR000315 | GO:0008270 | |
| Bda14g00574 | 200 | SMART | bboxneu5 | 53 | 100 | IPR000315 | GO:0008270 | |
| Bda14g00574 | 200 | SMART | bboxneu5 | 4 | 47 | IPR000315 | GO:0008270 | |
| Bda14g00574 | 200 | CDD | Bbox1_BBX-like | 5 | 47 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bda08g00955 | Bda14g00574 | CCT | |
| Bda06g00954 | Bda14g00574 | CCT | |
| Bda08g00955 | Bda14g00574 | ECH | |
| Bda06g00954 | Bda14g00574 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda11g01843 | Bda-Chr11:53635914 | Bda14g00574 | Bda-Chr14:4384124 | 4.40E-22 | dispersed | |
| Bda14g00574 | Bda-Chr14:4384124 | Bda14g00989 | Bda-Chr14:8030086 | 2.77E-23 | dispersed | |
| Bda05g00809 | Bda-Chr5:56536770 | Bda14g00574 | Bda-Chr14:4384124 | 4.78E-40 | transposed | |
| Bda01g01521 | Bda-Chr1:51110063 | Bda14g00574 | Bda-Chr14:4384124 | 2.19E-65 | wgd | |
| Bda01g00506 | Bda-Chr1:32057229 | Bda14g00574 | Bda-Chr14:4384124 | 8.38E-66 | wgd | |
| Bda14g00574 | Bda-Chr14:4384124 | Bda06g00954 | Bda-Chr6:26410287 | 1.32E-85 | wgd | |
| Bda14g00574 | Bda-Chr14:4384124 | Bda08g00955 | Bda-Chr8:18590465 | 3.43E-85 | wgd | |
| Bda14g00574 | Bda-Chr14:4384124 | Bda08g01236 | Bda-Chr8:50639497 | 8.68E-62 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 17034 | PF00643 | zf-B_box | 1.10E-07 | No_clan | Bda | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda14g00574 | - | - | mnt:21391799 | 253.062 |