Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00624 ATGTTATCGAAATTGGCAAACTTTTTGAAGGCCTGTTTCCGGCCACGGTCGGATCAGGAGGGCCTGCTTTGGTACAAAGATAGCGGACAACATCTGAATGGTGAGTTTTCTATGGCTGTTGTTCAAGCCAACAATTTACTTGAGGATCAGAGCCAGATCGAGTCTGGAACTTTGAGCTTGAGTGAGTCTGGTCCTTACGGTGTATTTGTCGGTGTATATGATGGGCATGGAGGACCCGAGACATCTCGCTATATAAATGATCACCTCTTTCAGCACCTGAAAAGGTTCACTTCTGAACAACAAACCATGTCCGTAGACGTAATTCGTAAGGCAATTCAAGCAACGGAGGAGGGATTTACATCAGTTGTTACAAAACAATGGCCAATGAAGCCGCAAATTGCAGCTGTCGGATCTTGCTGTCTTGTCGGGGTTATATGCGGTGAATATCTTTATATCGCCAATCTTGGGGATTCTCGTGCCATTTTGGGAAGAGTCGTAAAAGCTACAGGGGAGGTTCTTTCGATCCAACTGTCAGCCGAACACAATGCAAGCATAGAATCTGTGAGACAAGAGCTGCAATCTTTACATCCTGACGACTCACAGATAGTCGTCTTGAAGCATAACGTCTGGCGTGTTAAGGGTCTTATTCAGGTTTCTCGATCTATCGGCGATGTGTATCTGAAAAAACCCGAGTTCAATCGGGAGCCTCTGTATGTAAGGTTTCGCCTTCGTGAGTCTTTCAAGAAGCCAATTTTGAGCGCTGAACCATCCATTTCTGTTGTTCGGTTGGAACCCGACGATCAATTTATTATATTTGCATCGGACGGCCTTTGGGAACACTTTACCAATCAGGAAGCAGTTGATATAGTTCAGAAACAACCACACAGTGGAAGTGCAAGGAGGCTGGTGAAAGCTGCTCTGCAAGAAGCAGCAAAGAAGAGGGAAATGAGATATTCGGATTTGAAGAAGATCGACAGAGGGGTACGAAGGCATTTCCATGATGATATCACCGTGATCATCGTCTTTCTCGACTCCAACCTCATATGCAGGGCGAGCTCGGGAAAGAGCCCGAGTGTCTCAGTGAGAGGGGGTGGAATCCATCTCCCTCACAACACCTTGGCTCCTTTTGCTGCACCACCTGAATCTGGAGGTACCTGA 1158 46.55 MLSKLANFLKACFRPRSDQEGLLWYKDSGQHLNGEFSMAVVQANNLLEDQSQIESGTLSLSESGPYGVFVGVYDGHGGPETSRYINDHLFQHLKRFTSEQQTMSVDVIRKAIQATEEGFTSVVTKQWPMKPQIAAVGSCCLVGVICGEYLYIANLGDSRAILGRVVKATGEVLSIQLSAEHNASIESVRQELQSLHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKPEFNREPLYVRFRLRESFKKPILSAEPSISVVRLEPDDQFIIFASDGLWEHFTNQEAVDIVQKQPHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIIVFLDSNLICRASSGKSPSVSVRGGGIHLPHNTLAPFAAPPESGGT 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4685272 4687669 + Bda027379.1 Bda14g00624 20675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00624 385 PANTHER ALPHABET, ISOFORM E-RELATED 5 375 - -
Bda14g00624 385 ProSitePatterns PPM-type phosphatase domain signature. 69 77 IPR000222 GO:0043169
Bda14g00624 385 SUPERFAMILY PP2C-like 44 344 IPR036457 -
Bda14g00624 385 SMART PP2C_4 27 341 IPR001932 -
Bda14g00624 385 Gene3D - 19 351 IPR036457 -
Bda14g00624 385 ProSiteProfiles PPM-type phosphatase domain profile. 35 343 IPR001932 -
Bda14g00624 385 CDD PP2Cc 36 343 IPR001932 -
Bda14g00624 385 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 375 - -
Bda14g00624 385 Pfam Protein phosphatase 2C 68 312 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda08g00984 Bda14g00624 CCT
Bda14g00624 Bda15g01025 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00528 Bda-Chr11:5564139 Bda14g00624 Bda-Chr14:4685272 6.19E-40 dispersed
Bda14g00624 Bda-Chr14:4685272 Bda14g00960 Bda-Chr14:7730172 0 dispersed
Bda14g00624 Bda-Chr14:4685272 Bda15g01025 Bda-Chr15:19217571 6.04E-42 wgd
Bda14g00624 Bda-Chr14:4685272 Bda06g00474 Bda-Chr6:6763367 7.53E-18 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00624 - K01102 cit:102616048 657.521