Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00625 ATGGGGGTCGAACTAAACAATCACGACATGGAGGAGGGAATGCTGGAGGTTGGCATGGAGTACCGAACCGTTTCTGGGGTTGCTGGACCTTTGGTTATCCTAGATAAAGTTAAGGGACCCAAATTCCAGGAAATTGTTAATATTCGCTTAGGTGATGGAACAACCCGACGTGGCCAAGTTCTAGAAGTTGACGGGGAGAAAGCTGTTGTTCAGGTTTTTGAAGGAACTTCTGGAATTGACAATAAGTATACAACTGTGCAATTCACTGGAGAGGTTTTGAAAACCCCAGTCTCATTGGATATGCTTGGCCGCATATTTAATGGCTCCGGAAAGCCCATTGATAATGGTCCCCCGATTTTGCCTGAGGCATACTTGGATATTTCTGGTGCCTCCATCAACCCGAGTGAGAGAACATATCCAGAAGAGATGATACAGACTGGGATTTCGACAATTGACGTTATGAATTCCATTGCTAGAGGACAGAAGATTCCACTTTTCTCGGCTGCTGGTCTTCCTCATAACGAAATTGCTGCTCAAATATGTCGGCAGGCTGGTTTAGTCAAACGGTTAGAGAAATCAGATAATCTTCTTGGGGATGCAGAAGAAGACAACTTTGCTATTGTTTTTGCAGCTATGGGTGTAAACATGGAAACTGCACAGTTTTTCAAACGAGATTTTGAAGAAAATGGATCAATGGAGAGAGTGACGCTTTTTCTGAATCTTGCTAATGATCCTACGATTGAGCGTATTATTACTCCGCGAATTGCTCTTACTACGGCTGAGTATTTGGCTTATGAATGTGGAAAGCATGTTCTTGTCATTCTGACTGACATGAGTTCCTATGCAGATGCTCTTCGTGAGGTGTCAGCTGCTCGGGAGGAAGTACCTGGACGGCGTGGGTATCCTGGTTATATGTATACTGATCTGGCAACAATATATGAGCGTGCTGGACGAATCGAGGGACGAAAAGGGTCCATCACCCAAATTCCAATTCTAACTATGCCTAATGATGATATCACACATCCGACCCCAGATCTTACTGGATATATTACCGAGGGACAAATATACATTGATAGGCAGCTACATAACCGACAGATTTATCCACCAATCAACGTCCTGCCTTCCTTATCTCGTCTCATGAAGAGTGCTATTGGCGAGGGAATGACACGTAGGGATCATGCCGATGTATCCAACCAGCTCTATGCAAATTACGCGATTGGGAAGGACGTTCAAGCAATGAAAGCTGTGGTCGGAGAAGAAGCTCTTTCTTCTGAAGACCTGCTTTATCTGGAATTCTTGGACAAATTTGAGAGGAAGTTTGTCACACAAGGAGCCTACGACACCCGTAATATCTTCCAATCACTCGATTTAGCATGGACTTTGCTTCGAATTTTCCCTCGCGAACTCCTCCACCGTATACCGGCAAAGACCCTCGATCAGTACTACAGCCGAGAAATAGCTAATTAA 1467 44.44 MGVELNNHDMEEGMLEVGMEYRTVSGVAGPLVILDKVKGPKFQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGASINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNLLGDAEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHADVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVTQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQYYSREIAN 488
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4693528 4696863 + Bda027380.1 Bda14g00625 20676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00625 488 CDD V_A-ATPase_B 92 379 - -
Bda14g00625 488 Gene3D - 29 488 - -
Bda14g00625 488 CDD ATP-synt_V_A-type_beta_N 20 91 - -
Bda14g00625 488 TIGRFAM V-ATPase_V1_B: V-type ATPase, B subunit 20 486 IPR005723 GO:0033180|GO:0046961|GO:1902600
Bda14g00625 488 Pfam ATP synthase alpha/beta family, beta-barrel domain 24 90 IPR004100 GO:0046034|GO:1902600
Bda14g00625 488 ProSitePatterns ATP synthase alpha and beta subunits signature. 368 377 IPR020003 GO:0005524
Bda14g00625 488 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 3 487 IPR022879 -
Bda14g00625 488 CDD ATP-synt_V_A-type_beta_C 387 481 - -
Bda14g00625 488 PIRSF V-ATPsynth_beta/V-ATPase_B 11 488 IPR022879 -
Bda14g00625 488 Hamap V-type ATP synthase beta chain [atpB]. 18 486 IPR022879 -
Bda14g00625 488 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 147 377 IPR000194 GO:0005524
Bda14g00625 488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 383 IPR027417 -
Bda14g00625 488 PANTHER V-TYPE PROTON ATPASE SUBUNIT B1-RELATED 3 487 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda14g00625 Bda15g01024 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g01123 Bda-Chr13:13887086 Bda14g00625 Bda-Chr14:4693528 2.37E-26 dispersed
Bda13g01190 Bda-Chr13:14678875 Bda14g00625 Bda-Chr14:4693528 5.41E-17 dispersed
Bda14g00625 Bda-Chr14:4693528 Bda15g01024 Bda-Chr15:19195465 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00625 K02147 - pda:103720190 940.643