Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00631 ATGCAACGATCTGATAATGAAATGGTGGAAGATCCACCGTCGAAGCTGATTGGCCAGTTTCTGCAGAAACAGAAAACGTCCGGGCAAATGGCGCTGGATATGGATCTAGAAATGGACGAGCTTCGTGATCATGGCAGAAATTTGCCTCCGGTGCCGGAGACTCCGATTTTTAATCCTTCTAGGGAAATTAAAGTATCGTTTCAGACAAACTCAACGGAGATTTCTAATAACGACTCGTTTCGCCGGCGATATAGAGAGTCTCAGGAGCAGGAAGAATTAAGGGGACAGCAACCGCAAGAGCAGCGACACCATCGACGGAGATCTTCGAATTTCAATAACAATGGCGACGATCAGGTCCTGAGGTGCACTTCAAACGCGTCGTTTCAGAGGGAAGCTTCTTTTCAGAGAAGATCCAGTCTCCTCAGGTTGAAAACAAAGTCCAGATTAATGGATCCTCCCAACGAACCGGACCGGCGATCTGGTAGGGTTCCGAAATCCGGGCAATTTAGATCTGGATTACTAGGAAAGCCTATCGATGACGAAGAAGAAGACCCATTTTTCGACGAAGATCTTCCCGACGAGTATAAAAGAGCTAACCTAGGCGTTTTTACGATACTCCAATGGGTGAGCTTGGTTATGATAATGGCTGCTCTAATTTGCACTCTCTCCATTTCCGATTTAAGGAAAGTAATCCTTTGGAAGCTCAAGCTATGGAAATGGGAGCTGATGATTCTTGTTCTAATCTGCGGTCGATTAGTATCCGGCTGGGGAATCAGAATGGTCGTCTCCTTCATTGAAATGAACTTTCTCCTTCGTAAAAGGGTTCTATATTTCGTCTATGGAATCAGAAAACCAGTCCAGAATTGTCTCTGGTTAGGTCTAGTTTTAATCGTTTGGCATCTGCTTTTCGACAAGAGAGTAGAAGCTGAAACTAAAGGCAAGGCTCTCCGATATGTGACCAAGATACTGGTTTGCCTTCTCGTCGGATTCTTGATTTGGTTAGTGAAAACCCTAATGGTGAAAGTGTTAGCTTCTTCTTTCCATGTGAGTACTTACTTCGATCGGATCCAAGAATCGCTCTTCAACCAGTACGTAATCGAGACGCTCTCCGGACCACCGCTTATCCAAATTCAGAAGAACGACGAAGACGAAGAGAAACTCGCCGACGAAATGCGGAAGTTGCAGAGCGCCGGAGCGACAATTCCGGCAGACCTGAAGAATACTGCATTCTCGACGTTTAAAAGCGGGAGAGTGATAGGGAGCGGAGGGCTGCCGAAAGGTCCGAGTCCGCCTGGAAAGAGCATGAAGCTTTCCAGCTCGATTACGAAGAAAGGAGATGATCAGGGAATCACCATTGATCACCTGCACAAGCTCAGTCCAAAAAATGTTTCCGCTTGGAATATGAAGAGGTTGATGAACATCGTTCGACATGGGACTATTTCTACTTTTGATGAACAGATTCTGGGTGCTACTTCTAGGCATGAAGATGACTCTGCAACTCAGATTCGAAGTGAGAGAGAGGCAAAGGCAGCAGCCAGGAAAATCTTCCAGAACGTCGCTCGCCATGGATTCAAATACATCTACCTTGAGGATTTGATGCGTTTCATGCGAGAAGACGAAGCCATGAAAGCCATGAGTCTCTTCGACGGAGCTTCAGAAAGCAGAATGATAAGTAAATCCTCCCTAAAAAACTGGGTGGTGAATGCTTTCAGAGAGCGAAGAGCCCTAGCCTTAACCCTGAACGACACAAAAACAGCGGTTGACAAACTCCATAGAATAGTGAATTTCATCATAACCATCATTCTGATCGTCGTTTGGCTTCTCATACTGGAAATAGCAACAACCAAGTTTTTTCTCCTTGCCAGCTCTCAGCTCGTCCTCGCCGCCTTCGTCTTTGGAAACACCTGTAAAACAGTCTTCGAAGCTATCATCTTCTTGTTCGTCATACATCCCTATGATGTCGGCGACAGGTGCGAAATCGATGGAGTTCAGATGATTGTGGAAGAAATGAATATCTTGACAACTATTTTTCTGAGATACGATAATCAGAAGATTATATACCCAAACAGTGTTCTTTCGACCAAATCCATTCATAACTTTTACCGCAGTCCTGACATGGGCGACTCCATCGAGTTCTGCGTCCACGTATCGACTCCGGCCGAGAAAATTGCCGCCATAAGACACAGAATAGTGACGTTTGTAGAGGGGAAGAAAGAGCATTGGTGTCCGAACCCGACGATTGTATTCAAAGAGTTGGAAGAGTTAAACAGGGTTAGATGTGCAGTCTGGCTTACTCACAGAATGAACCATCAAGACATGGGCGAGAGGTGGGCGAGGCGGGCGGGTTTAGTTGAAGAGATGGTTAAGATTTTCCGGGACCTCGATATTCAGTACCGCCTTTTCCCTCTCGACATTAACGTCCGATCACTACCTCCGGCAGCCTCTTTCGAGATTCCGCCCAATCGGACTGCCATGGCTGGCTGA 2484 46.22 MQRSDNEMVEDPPSKLIGQFLQKQKTSGQMALDMDLEMDELRDHGRNLPPVPETPIFNPSREIKVSFQTNSTEISNNDSFRRRYRESQEQEELRGQQPQEQRHHRRRSSNFNNNGDDQVLRCTSNASFQREASFQRRSSLLRLKTKSRLMDPPNEPDRRSGRVPKSGQFRSGLLGKPIDDEEEDPFFDEDLPDEYKRANLGVFTILQWVSLVMIMAALICTLSISDLRKVILWKLKLWKWELMILVLICGRLVSGWGIRMVVSFIEMNFLLRKRVLYFVYGIRKPVQNCLWLGLVLIVWHLLFDKRVEAETKGKALRYVTKILVCLLVGFLIWLVKTLMVKVLASSFHVSTYFDRIQESLFNQYVIETLSGPPLIQIQKNDEDEEKLADEMRKLQSAGATIPADLKNTAFSTFKSGRVIGSGGLPKGPSPPGKSMKLSSSITKKGDDQGITIDHLHKLSPKNVSAWNMKRLMNIVRHGTISTFDEQILGATSRHEDDSATQIRSEREAKAAARKIFQNVARHGFKYIYLEDLMRFMREDEAMKAMSLFDGASESRMISKSSLKNWVVNAFRERRALALTLNDTKTAVDKLHRIVNFIITIILIVVWLLILEIATTKFFLLASSQLVLAAFVFGNTCKTVFEAIIFLFVIHPYDVGDRCEIDGVQMIVEEMNILTTIFLRYDNQKIIYPNSVLSTKSIHNFYRSPDMGDSIEFCVHVSTPAEKIAAIRHRIVTFVEGKKEHWCPNPTIVFKELEELNRVRCAVWLTHRMNHQDMGERWARRAGLVEEMVKIFRDLDIQYRLFPLDINVRSLPPAASFEIPPNRTAMAG 827
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4734301 4737044 - Bda027387.1 Bda14g00631 20682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00631 827 PIRSF Memb_At2g17000 2 825 IPR016688 -
Bda14g00631 827 MobiDBLite consensus disorder prediction 41 119 - -
Bda14g00631 827 MobiDBLite consensus disorder prediction 148 164 - -
Bda14g00631 827 SUPERFAMILY Sm-like ribonucleoproteins 641 700 IPR010920 -
Bda14g00631 827 Pfam Mechanosensitive ion channel 592 796 IPR006685 GO:0016020|GO:0055085
Bda14g00631 827 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 6 816 IPR016688 -
Bda14g00631 827 Coils Coil 377 397 - -
Bda14g00631 827 MobiDBLite consensus disorder prediction 78 111 - -
Bda14g00631 827 MobiDBLite consensus disorder prediction 145 185 - -
Bda14g00631 827 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 6 816 - -
Bda14g00631 827 MobiDBLite consensus disorder prediction 61 77 - -
Bda14g00631 827 Gene3D - 651 700 IPR023408 -
Bda14g00631 827 MobiDBLite consensus disorder prediction 421 443 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00375 Bda-Chr2:44133660 Bda14g00631 Bda-Chr14:4734301 0 dispersed
Bda11g00316 Bda-Chr11:3506350 Bda14g00631 Bda-Chr14:4734301 3.65E-178 dispersed
Bda14g00631 Bda-Chr14:4734301 Bda03g00302 Bda-Chr3:2654706 4.28E-141 wgd
Bda14g00631 Bda-Chr14:4734301 Bda06g00468 Bda-Chr6:6725575 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00631 K22048 - csv:101210264 1110.52