Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00639 ATGGCTTTGTTTATCTGCTCTCTCTTTTTTCTAGTTTCCTCTGTTACTGCTTGTGATCGCTGTGTGCATCAGACCAGAGCTGCTTACTTCTCCAGAGCTTCCTCTCTCTCTTCTGGGGCTTGTGGGTATGGATCATTATCACTGGGCTTCAACAGTGGACATCTTGCAGCTGGTGTGCCTTCCCTTTACAAAGATGGAGCTGGTTGTGGTGCTTGCTTTCAGATAAGATGCAAGAACACGACTCTTTGTACAAGATCGGGGACGAAAGTGATTTTGATTGATCTCAATACAAATAACGAAACAGATTTTGTTCTCAGCAGCAGAGCCTTTACAGCAATGGCTCAAAAGGGTATGTCCAAGGACATTCTGAGACATGGAGTCGTTGATGTGGAATATAAGAGAGTACCATGCGAGTATAAAAATCAAAACTTGGCCGTGCGAGTCGAAGAATCGAGCAAAAAACCAAATTATCTAGCAATCAAGTTCTTATACCAAGGTGGTCAGACAGCAATAGTTGGCGTTGATGTTGCTCAGCAGGTGGGTTCTTCAAATTGGAGCTTCTTGAGTAGAAAGCATGGCGCTGTGTGGGATACAAGTAGAGTCCCAAACGGAGCTCTGCAATTTCGCATGGTGGTGACTTCTGGGTACGACGGAAAATGGATCTGGGCAAAGAGTGTTCTTCCTGAAGACTGGAAATCAGGGGTCACATATGATTCTGGAGTTCAAATCAATGACATCGCACAAGAGGGTTGCTTTCCTTGCAACCTGGAAAACTGGAAATGA 783 44.7 MALFICSLFFLVSSVTACDRCVHQTRAAYFSRASSLSSGACGYGSLSLGFNSGHLAAGVPSLYKDGAGCGACFQIRCKNTTLCTRSGTKVILIDLNTNNETDFVLSSRAFTAMAQKGMSKDILRHGVVDVEYKRVPCEYKNQNLAVRVEESSKKPNYLAIKFLYQGGQTAIVGVDVAQQVGSSNWSFLSRKHGAVWDTSRVPNGALQFRMVVTSGYDGKWIWAKSVLPEDWKSGVTYDSGVQINDIAQEGCFPCNLENWK 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4786850 4788741 + Bda027396.1 Bda14g00639 20690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00639 260 Gene3D - 139 244 IPR036749 -
Bda14g00639 260 Pfam Lytic transglycolase 56 132 IPR009009 -
Bda14g00639 260 Gene3D - 12 138 IPR036908 -
Bda14g00639 260 SUPERFAMILY PHL pollen allergen 143 239 IPR036749 -
Bda14g00639 260 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 156 239 IPR007117 -
Bda14g00639 260 PANTHER EXPANSIN-B3 6 256 - -
Bda14g00639 260 Pfam Expansin C-terminal domain 145 228 IPR007117 -
Bda14g00639 260 PRINTS Expansin/Lol pI family signature 225 239 IPR007118 GO:0005576
Bda14g00639 260 PRINTS Expansin/Lol pI family signature 185 199 IPR007118 GO:0005576
Bda14g00639 260 PRINTS Expansin/Lol pI family signature 125 141 IPR007118 GO:0005576
Bda14g00639 260 PRINTS Expansin/Lol pI family signature 37 55 IPR007118 GO:0005576
Bda14g00639 260 PRINTS Expansin/Lol pI family signature 59 77 IPR007118 GO:0005576
Bda14g00639 260 PRINTS Major pollen allergen Lol pI signature 114 129 IPR005795 GO:0005576|GO:0019953
Bda14g00639 260 PRINTS Major pollen allergen Lol pI signature 163 178 IPR005795 GO:0005576|GO:0019953
Bda14g00639 260 PRINTS Major pollen allergen Lol pI signature 57 68 IPR005795 GO:0005576|GO:0019953
Bda14g00639 260 PRINTS Major pollen allergen Lol pI signature 147 162 IPR005795 GO:0005576|GO:0019953
Bda14g00639 260 PRINTS Major pollen allergen Lol pI signature 215 232 IPR005795 GO:0005576|GO:0019953
Bda14g00639 260 PANTHER EXPANSIN-LIKE A1-RELATED 6 256 - -
Bda14g00639 260 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 38 142 IPR007112 -
Bda14g00639 260 SUPERFAMILY Barwin-like endoglucanases 7 141 IPR036908 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00447 Bda-Chr7:5775219 Bda14g00639 Bda-Chr14:4786850 2.86E-38 dispersed
Bda14g00639 Bda-Chr14:4786850 Bda11g00423 Bda-Chr11:4504147 4.04E-30 dispersed
Bda14g00639 Bda-Chr14:4786850 Bda13g00660 Bda-Chr13:7549017 1.09E-27 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00639 - - jre:109006647 431.024