Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00648 ATGGGTAAGGTAGTGGAGAGGAGGAAGAAGAAGAAAGGACGGCCCTCTCTATTAGATCTTCAAAAACGCACAATCAAAGAACAGCAGCAGCTCCAGCAGATAAACTCCAACCATAACTTGGACGCTCGCTCTAGCCCTAATTCCAGAATTGCCACTACCGTTCGGCGATCTACTCGCCGAAATACCTTCCCCGACACGCTCTCCCCGGAGGAGGAGGAGGAGGAGGGTTTTGATGACCCGGAAGACGACGATGAATTGACTGGGAAGCACCGTGAGAAGAAGCTCAAGCTTGTCCTCCGTTTGACATCTCAGAAATCTTCTTTGAATTCGTCGTCTTTAAATTCGGGGGGCCTGGATTCGAATGCGGAGGTGGATGACGACGAGTATGCTAATAAGAAGCGAAAGATCAATGCAATCGGAGATGGATCTGGGCTCGGAAACCTCGAAAAGGCTGAAAAGTCTAATTCTGCTGCAAAACCGACAACAACCCTACAAGGGGCGGAGTTGGATTTTGGACCCTCGACTCCTTTGCCGGATGAGAAGCTTTTACTGTTCATCCTGGACAGGCTTCAAAAGAAGGACACATATGGTGTGTTTTCTGAACCAGTGGACCCGGAGGAGCTTCCCGATTACCATGAAGTTATTAAGAACCCGATGGATTTTGCCACGGTGAGGAAGAAGCTTGCCAGCAGAGCTTACGCCAAATTGGAAGAGTTCGAGAAAGATGTTATCTTAATCTGCTCGAATGCAATGCAGTATAACGCTCCAGATACCATCTATTTTAGGCAGGCACGATCCATACTGGAATTGGCAAAAAAGAGCTTCAGGAATTTAAGACAAGATAGTGATGATAATGAACCGGAACCTAAAGTAGTCAGGAGAGGAAGACCACCGACTAAGAATTTGAAACAGCCAATCGGTCAGTCATTCTCCGATCGCGCTAGTTCAGAGTTGTCGGATGCTACCCTTGCTACTGGTGGAGAAAACAGATATTATGATCTGAGAAAAGGACCTCACCTCTCGGAGAAGGCTGGTTCGGCAGAGTTTTTGGGGAAATTCCCCGGTTCTCGCATTACTGACGCCAATTCAAATTGGTTGAATGAAAACAGATTCGAGAGAAATAATGATTTTACTGGTTCTTTGATGAAAAGTTACTCGACAAAGCAAGCGAAAAAACAGATTGTACCAGATGAGAACAGGCGGAACACATATAAGCAATTCCAATTATTAGATGGTGGATGGGAGTCGTCAGTTATGAGTACATTTTCGCGAGAGAGAAAGCAACTCATGGCTGTGGGGCTTCACTCGGACCATGGTTACGCCAGGAGCCTTGCTCGATTTGCTGCCAATCTTGGGTCTATTGCTTGGAAAGTTGCTTCTAAAAAAATCGAAAAATCCTTGCCTGCCGGAGGCAAGTTTGGCCATGGTTGGGTTGGAGAAAACGATGTCATACCAACCAGACCATTGCTATCAACATCAGCTGAAGGCCAATTATCAATGTTGCAGCCCTTTCTTGGTCAGAATAACTCATCTTCAGCTGCAGCTTCTTCAACTCCTGAGATTAAGGATGTTAGTTTACCGAAAATTCCCGACGAAAACACTTCCTCGGAGAAGGATGGACCTTCCATGGATTCCGGCTTAGAAAAAAATATAAGCAAGCCTCCTACCGAATCTCCTGAACCTCTCACCGGAAAAGGGTATGATATGCATAACAGCAGTATGAATCCAATTCAATCCAAACCTTCATTTCAGGTTCATAAAAGTCATTTGCAACCTGGTCTGAATGGATGTAGTAATAGCGCCTATGGCTTCAACCCTTCAGATCAACTAGCAAAACTAATCGGATCAGCCGGTTTGAACTTGCAGCCATCTCAAATGCTTCAGACAATATCTAGAACTACTAACACTGTCTCCACCACGACACCAAGCAGTGTAATTCGACCTGACGCCGAGTTTTCTCAAAGTACAGGCAAGATGAATTCAGGTACTTTGTTTAAACGGGATGAGGTGTTGACTCCTCAAACCAAAGTTGATCTAGTTCCTCCTGATCTTAATGTTGGATTTCAGTCACCAGGGTCACCTAGCTCGAGCCGAGTTGACTCAGCAGCACGGCCTGACTTAGCGTTGCAGCTCTGA 2136 45.83 MGKVVERRKKKKGRPSLLDLQKRTIKEQQQLQQINSNHNLDARSSPNSRIATTVRRSTRRNTFPDTLSPEEEEEEGFDDPEDDDELTGKHREKKLKLVLRLTSQKSSLNSSSLNSGGLDSNAEVDDDEYANKKRKINAIGDGSGLGNLEKAEKSNSAAKPTTTLQGAELDFGPSTPLPDEKLLLFILDRLQKKDTYGVFSEPVDPEELPDYHEVIKNPMDFATVRKKLASRAYAKLEEFEKDVILICSNAMQYNAPDTIYFRQARSILELAKKSFRNLRQDSDDNEPEPKVVRRGRPPTKNLKQPIGQSFSDRASSELSDATLATGGENRYYDLRKGPHLSEKAGSAEFLGKFPGSRITDANSNWLNENRFERNNDFTGSLMKSYSTKQAKKQIVPDENRRNTYKQFQLLDGGWESSVMSTFSRERKQLMAVGLHSDHGYARSLARFAANLGSIAWKVASKKIEKSLPAGGKFGHGWVGENDVIPTRPLLSTSAEGQLSMLQPFLGQNNSSSAAASSTPEIKDVSLPKIPDENTSSEKDGPSMDSGLEKNISKPPTESPEPLTGKGYDMHNSSMNPIQSKPSFQVHKSHLQPGLNGCSNSAYGFNPSDQLAKLIGSAGLNLQPSQMLQTISRTTNTVSTTTPSSVIRPDAEFSQSTGKMNSGTLFKRDEVLTPQTKVDLVPPDLNVGFQSPGSPSSSRVDSAARPDLALQL 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4851309 4855957 - Bda027405.1 Bda14g00648 20699

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00648 711 ProSitePatterns Bromodomain signature. 197 253 IPR018359 -
Bda14g00648 711 MobiDBLite consensus disorder prediction 28 91 - -
Bda14g00648 711 MobiDBLite consensus disorder prediction 137 173 - -
Bda14g00648 711 MobiDBLite consensus disorder prediction 278 319 - -
Bda14g00648 711 MobiDBLite consensus disorder prediction 1 20 - -
Bda14g00648 711 ProSiteProfiles Bromodomain profile. 191 261 IPR001487 GO:0005515
Bda14g00648 711 MobiDBLite consensus disorder prediction 154 169 - -
Bda14g00648 711 PANTHER BROMODOMAIN AND WD REPEAT-CONTAINING PROTEIN 1-LIKE 1 711 - -
Bda14g00648 711 MobiDBLite consensus disorder prediction 1 16 - -
Bda14g00648 711 Gene3D - 178 294 IPR036427 GO:0005515
Bda14g00648 711 MobiDBLite consensus disorder prediction 633 662 - -
Bda14g00648 711 MobiDBLite consensus disorder prediction 508 580 - -
Bda14g00648 711 MobiDBLite consensus disorder prediction 633 711 - -
Bda14g00648 711 MobiDBLite consensus disorder prediction 28 64 - -
Bda14g00648 711 MobiDBLite consensus disorder prediction 68 82 - -
Bda14g00648 711 PANTHER BROMODOMAIN CONTAINING PROTEIN 1 711 - -
Bda14g00648 711 SUPERFAMILY Bromodomain 176 284 IPR036427 GO:0005515
Bda14g00648 711 PRINTS Bromodomain signature 194 207 IPR001487 GO:0005515
Bda14g00648 711 PRINTS Bromodomain signature 242 261 IPR001487 GO:0005515
Bda14g00648 711 PRINTS Bromodomain signature 208 224 IPR001487 GO:0005515
Bda14g00648 711 PRINTS Bromodomain signature 224 242 IPR001487 GO:0005515
Bda14g00648 711 SMART bromo_6 172 280 IPR001487 GO:0005515
Bda14g00648 711 CDD Bromodomain 179 273 - -
Bda14g00648 711 MobiDBLite consensus disorder prediction 278 295 - -
Bda14g00648 711 MobiDBLite consensus disorder prediction 302 319 - -
Bda14g00648 711 Pfam Bromodomain 186 265 IPR001487 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00648 K22184 BRD9; bromodomain-containing protein 9 - qsu:111985563 673.7
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00716 Bda-Chr5:55556696 Bda14g00648 Bda-Chr14:4851309 5.22E-85 dispersed
Bda12g00914 Bda-Chr12:39847068 Bda14g00648 Bda-Chr14:4851309 8.80E-79 dispersed
Bda14g00648 Bda-Chr14:4851309 Bda07g01406 Bda-Chr7:16948034 1.61E-10 dispersed
Bda05g00303 Bda-Chr5:45580551 Bda14g00648 Bda-Chr14:4851309 1.83E-08 transposed
Bda05g00828 Bda-Chr5:56835306 Bda14g00648 Bda-Chr14:4851309 2.75E-14 transposed
Bda10g00565 Bda-Chr10:39645200 Bda14g00648 Bda-Chr14:4851309 6.94E-13 transposed
Bda14g00648 Bda-Chr14:4851309 Bda03g00322 Bda-Chr3:2749994 4.44E-118 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g294 . . . . . Bpe12g00149 . . Cmo19g00818 Cmo11g01786 . . . . . Cpe04g00631 Cpe15g00642 Bhi05g01248 Tan02g0781 . . . . . Cla02g00347 Cam02g0356 Cec02g0357 Cco02g0363 Clacu02g0348 Cmu02g0345 Cre02g0677 . . . . . Csa07g00186 . Cme01g01147 Blo04g00606 Blo13g00473 . Bda14g00648 Bpe15g00784 . Bma03g00637 Bma08g00717 . . . Cma11g01333 Cma19g00798 Car11g01413 Car19g00614 . . . . . . . . . . . . . . . . Lsi11g01285 . Chy01g00594 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005813 1 1 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 2 0 39
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda14g00648 Bda_Chr14 FPKM 0.0 0.790317 5.538982 6.060801 0.0 0.0 0.0 20.114399 23.816761