Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00649 ATGGCGACGGCGCAGAATCAAGCGCCGAATACGGATCTATTTGATGCCTATTTTCAGCGAGCTGATTTGGACCGGGATGGTCGTATTAGTGCTGCCGAAGCTGTCGCTTTCTTCCAAGGCTCTGGATTGTCTAAACAGGTCCTTGCGCAGATATGGGCATTGGCTGATCCGAGGCAGATTGGTTTCCTTGGTCGATCAGAGTTTTATAATGCCCTTAAACTGACTACGGTGGCACAAAAAAAGTGGGAACTAACTCCTGAAATTGTAAAAACAGCATTATATGGGCCGGCTTCAGCTAAAATACCAGCACCACAAATGAATGTAACAGCCATGCCACCATCTCAGCTCAATATTGCTGCAGCATCAACTGCCTCTCAGATTGGGACCGGCACTCCAACATCCTCCCAAAACATTGCATTTAGAGGACCGCAAGTTATAAATCAGCAACAAGTTTCTTTTCAAGCAAATCAATTAATAAGGGCACCACAGTCCACATCCCCTGTCCAAATTATTGGCACACAAGGATTTCCAGAAAGTGACATTGTTGGAAGGAATTCCTCTCCAAGCGCTAGCGTCTCGAGTGATTGGGTTGGTGGGCGAGTTGGAGTTCAGGGAATTCCCTCGCAAGTTCCTGACAAAGGAGTTGTTTCTTCCACTTCTCAACTTGGGTTAGGAGTATCAACATCAGCGTCCACAGCTTCACTACCACCTAGACCTCCACCCTCTGGGATAAGACCTTCTGGACCACCAACTAAGGATTCGAGAATAGTGGGTATTTCTGGTAATGGTGTTGCTTCCAACTCATTTTTTGGAGATGATGTATTTTCTGCTACTCCACCTCCCCTGAGGCAAGATTCTTCCTCTGGGGGCATTTTATCGGCCAATATTCCAAGACCACCTGGGATACATTCTTCATTAAGGCCCAGTGTTGATTCTACTGGGAGTTCATTCCCTAAGCAACCTGATGGTGGTCACCTCAAGCAGCCTCAGGTAGTTTTCAGGTCAAATCAACAGGTCTTAACTCAGCCTTCTTTATCTGGACCTTCTCCCCGGTCGGAGATCTCTGTTTCCAGTCAGTCCCCACATCCATGGCCTAGCATGACACAGAATGATGTTCAGAAGTATACCAAAGTGTTTGTTGAAGTAGACAAAGATAGAGATGGAAAAATCACTGGGGCAGAAGCGCGCGATTTGTTTTTGAGTTGGAGAATGCCAAGAGAGATATTAAAGCAGGTGTGGGACTTATCCGATCAAGATAACGATAGCATGCTTTCTCTCAGGGAGTTCTGCATTGCTCTATATTTAATGGAGAGGTACAGAGAAGGTCGTCCTCTTCCAGCTGCATTTCCAAGCAACGTCATGCCTCATTTTCCTAATAGTACTCCTATGACAAACTATAATAGTGCTGCTTGGGGACCTAGATCTGAATTCCAGCAACAGAAAGGGGTTTCTGCTTCTGATACTCACTCAGCCCGTGATACTGGAGTAACAGTTAGGCCTTCGATTCTACCTTCTGTCCCCAGTGCAGATGAAGGGTTACTGATTAAGGAGCAGAAATCAAAAGTGCCAGTATTAGAGAAACACCTTGTCAATCAACTTAGTACAGAGGAGCAGAACTCACTTAACATGAAGTTCCAAGATGCTACAGACGCTGAGAAAAAGGCACTCATTTCAATGTTTTTGCTTTTGTTGCTTATGAACATTTCGTCAATCATTTGTTTACATGATTTATTTTATTGGCTGCAGGTTGAAGAACTGGAGAAAGAAATCTTAGAGTCAAAAGAGAAAATTGAATTTTACCGTGCTAAAATGCAGGAACTTCTATCTCATGGTCTTCCTTCCTTCTTTTTCTCGTTTCTCTTGAGCATTTACACTCTATTCTGTCTTTTTTTTTTATCGAAACTGATGGAAATCAATTTTCATCTATTGACAAGCATTAGTTTTACTCCTAAGCAGAAATTAACTTCAAATAGGATTCTTTACAAGAGTAGATGTGACAATCGCCTTAATGAGATCACAGAACGGGTGTCTGCAGATAAACGCGAGGCTGATTCCCTTGCAAAGAAATATGAAGAAAAGTATAAACAAATTGGAGATGTAGCTTCCAAGTTAACGATTGAAGAAGCAACCTTTCGGGATATACAGGAGAGGAAGATGGAGTATTACCAAGCAATTATAAAATTGGACCAAGATGGCAATGCTGATAATATTCAGTTAATTGTTCAGGTTCATGCTGATCGCGTACAGTCAGATATTGATGAGTTAGTGAAAATACTCAACGAGCGTTGCAAGACTTATGGATTGCGTACAAAGCCAACTACTTTAACTGAACTTCCTTTTGGTTGGCAACCTGGTATCCAAGAAGGCTCTGCTGACTGGGATGAAGAATGGGATAAGTTTGATGATGAAGGATTTACTTTTGTGAAGGAGCTTACACTTGATGTGCAGAATGTGTTGGCTCCTCCTAAACAGAAATCAAAGTTCATTCAAAATGAGCAAAGTTTGGCAGTTGATAGTCCAGGAATAGGAGCCTTATCTGACGCTAAAGCCAATGGAGAAAAGCCCCATATTACTGATGAAGCAGTTGTAAATGGAGCAAACAATACAAAAAGTGAACCTGAATCTGTAAAAAGTGTTCCTAGTAGCCCAGTTGGTAGTAGTGCTACTGAAAGTCCAAGGGAATTTTCAGAGTCTATCTTTAGAAAAACTTCTGGCTTTGATGTATCGCCACGGAATAAAGAAATCCAAAGTGATCATGGAGGAGCAGGATCTCCATATTTTGGGGACAAGAGTTTTGATGAACCGATGTGGGGATCATTTGACACTAATGATGACATTGACTCCGTGTGGGGCTTTAACACAGTTAATGCGACCAAGGATTTGGGTTATGCTAGCAGTAGTAGAGACAACTACTTTTTCGAGTCTGGAGATTTGGGTCTAAATCCCATCAGAACAGATGTCTCTGGTCAGAAGAAAGGCGGATTTAGTTTTGACGAGTCTGTTCCTAGTACACCGCTTTTCAGTTCAGGCAATTCACCGCATGGTTCAGAACATAATTTTGACAGTTTTTCTAGATTTGATTCCTTCCGAATGCAAGATAGTGGACTTTTCTCCCAGCGAGAAACACTAGCTCGATTTGATTCAATGCGAAGCAGTAAAGACTTTGATCATGGCCAGAGATTTCCACCGTTAGATGATTCAGACCCTTTGGTTCTTCAGGGCCATTTAGAACATCGCAAGAGAATCAAACTCCGAGAAGAGGATCAGACACTTGGAGTGCCTTCTAGCCAGGTATTTCGGCTTCTTATCATCCAAGCATTCAGTTTCAGCTTTTTCTCAATTTCAGTCTTTTATTTTTCTTGGTTTTGTTGTGAGTTGTGTGCTTAG 3387 42.37 MATAQNQAPNTDLFDAYFQRADLDRDGRISAAEAVAFFQGSGLSKQVLAQIWALADPRQIGFLGRSEFYNALKLTTVAQKKWELTPEIVKTALYGPASAKIPAPQMNVTAMPPSQLNIAAASTASQIGTGTPTSSQNIAFRGPQVINQQQVSFQANQLIRAPQSTSPVQIIGTQGFPESDIVGRNSSPSASVSSDWVGGRVGVQGIPSQVPDKGVVSSTSQLGLGVSTSASTASLPPRPPPSGIRPSGPPTKDSRIVGISGNGVASNSFFGDDVFSATPPPLRQDSSSGGILSANIPRPPGIHSSLRPSVDSTGSSFPKQPDGGHLKQPQVVFRSNQQVLTQPSLSGPSPRSEISVSSQSPHPWPSMTQNDVQKYTKVFVEVDKDRDGKITGAEARDLFLSWRMPREILKQVWDLSDQDNDSMLSLREFCIALYLMERYREGRPLPAAFPSNVMPHFPNSTPMTNYNSAAWGPRSEFQQQKGVSASDTHSARDTGVTVRPSILPSVPSADEGLLIKEQKSKVPVLEKHLVNQLSTEEQNSLNMKFQDATDAEKKALISMFLLLLLMNISSIICLHDLFYWLQVEELEKEILESKEKIEFYRAKMQELLSHGLPSFFFSFLLSIYTLFCLFFLSKLMEINFHLLTSISFTPKQKLTSNRILYKSRCDNRLNEITERVSADKREADSLAKKYEEKYKQIGDVASKLTIEEATFRDIQERKMEYYQAIIKLDQDGNADNIQLIVQVHADRVQSDIDELVKILNERCKTYGLRTKPTTLTELPFGWQPGIQEGSADWDEEWDKFDDEGFTFVKELTLDVQNVLAPPKQKSKFIQNEQSLAVDSPGIGALSDAKANGEKPHITDEAVVNGANNTKSEPESVKSVPSSPVGSSATESPREFSESIFRKTSGFDVSPRNKEIQSDHGGAGSPYFGDKSFDEPMWGSFDTNDDIDSVWGFNTVNATKDLGYASSSRDNYFFESGDLGLNPIRTDVSGQKKGGFSFDESVPSTPLFSSGNSPHGSEHNFDSFSRFDSFRMQDSGLFSQRETLARFDSMRSSKDFDHGQRFPPLDDSDPLVLQGHLEHRKRIKLREEDQTLGVPSSQVFRLLIIQAFSFSFFSISVFYFSWFCCELCA 1128
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4859279 4868511 + Bda027406.1 Bda14g00649 20700

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00649 1128 PANTHER EH DOMAIN 583 608 - -
Bda14g00649 1128 CDD EH 375 441 IPR000261 GO:0005515
Bda14g00649 1128 SUPERFAMILY EF-hand 361 457 IPR011992 -
Bda14g00649 1128 ProSiteProfiles EH domain profile. 371 460 IPR000261 GO:0005515
Bda14g00649 1128 SUPERFAMILY EF-hand 11 90 IPR011992 -
Bda14g00649 1128 PANTHER EH DOMAIN 7 554 - -
Bda14g00649 1128 ProSiteProfiles EF-hand calcium-binding domain profile. 370 405 IPR002048 GO:0005509
Bda14g00649 1128 SMART eh_3 2 98 IPR000261 GO:0005515
Bda14g00649 1128 SMART eh_3 363 459 IPR000261 GO:0005515
Bda14g00649 1128 ProSiteProfiles EH domain profile. 10 100 IPR000261 GO:0005515
Bda14g00649 1128 MobiDBLite consensus disorder prediction 227 260 - -
Bda14g00649 1128 Pfam EF hand 15 33 IPR002048 GO:0005509
Bda14g00649 1128 SMART efh_1 13 41 IPR002048 GO:0005509
Bda14g00649 1128 SMART efh_1 408 436 IPR002048 GO:0005509
Bda14g00649 1128 SMART efh_1 374 402 IPR002048 GO:0005509
Bda14g00649 1128 Coils Coil 583 603 - -
Bda14g00649 1128 MobiDBLite consensus disorder prediction 275 327 - -
Bda14g00649 1128 ProSiteProfiles EF-hand calcium-binding domain profile. 9 44 IPR002048 GO:0005509
Bda14g00649 1128 MobiDBLite consensus disorder prediction 862 896 - -
Bda14g00649 1128 CDD EH 14 80 IPR000261 GO:0005515
Bda14g00649 1128 Gene3D - 366 456 - -
Bda14g00649 1128 Coils Coil 669 689 - -
Bda14g00649 1128 MobiDBLite consensus disorder prediction 862 894 - -
Bda14g00649 1128 Pfam Cytoskeletal-regulatory complex EF hand 366 436 IPR000261 GO:0005515
Bda14g00649 1128 Gene3D - 5 102 - -
Bda14g00649 1128 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 7 554 - -
Bda14g00649 1128 PANTHER EH DOMAIN 659 1070 - -
Bda14g00649 1128 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 583 608 - -
Bda14g00649 1128 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 659 1070 - -
Bda14g00649 1128 MobiDBLite consensus disorder prediction 339 369 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00649 K12472 EPS15; epidermal growth factor receptor substrate 15 - jre:108997384 1042.34
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00649 Bda-Chr14:4859279 Bda15g01013 Bda-Chr15:18918483 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g298 . . . . . . . . Cmo19g00819 Cmo11g01788 . . . . Sed05g2162 Cpe04g00633 Cpe15g00643 Bhi05g01580 Tan02g0572 Cmetu01g1669 Lac12g0474 . . . Cla02g00345 Cam02g0354 Cec02g0355 Cco02g0361 Clacu02g0346 Cmu02g0343 Cre02g0675 Cone12ag1298 Cone8ag1333 . . . Csa07g00188 . Cme01g01145 Blo04g00607 Blo13g00472 . Bda14g00649 Bpe15g00782 . Bma03g00639 Bma08g00716 . . . Cma11g01331 Cma19g00799 Car11g01415 Car19g00615 . . . . . . . . . . . . . . . . Lsi11g01287 . Chy01g00592 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004902 2 2 2 2 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 3 1 1 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda14g00649 Bda_Chr14 FPKM 9.503809 11.051063 16.772888 17.257069 14.442719 14.350278 15.615876 33.763172 33.779461