Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda14g00661 | ATGGGTTATATATGTGATTTCTGTCGGTATCAAAGGTCAATGGTTTATTGCCGTTCCGATGCTGCCTGTTTGTGCTTATCATGTGATCGTAAGGTCCACTCGGCTAATGCCTTGTCAAGGCGCCATACGAGATCACTATTATGTGAGAAGTGCAATTTACAGCCTGCATTGGTAAGATGTGTTGAAGAGGGAATTTCTCTCTGTCAGAATTGTGATTGGATGTGCCACAACACGTCTACTTCTTCGTGTCACCAGAAGGAAACAATCAATTGCTATGCAGGTTGCCCATCAGCTTCTGAGCTTTCTTCTATTTGGTCATTTTTCATAGATCTGCCCACTGTAGGAGATGATTGTGAGCAAGAATTAGGATTAATGAGAATCACTGAGAATGGAGGCCACCCAGCAAATAATGCAGCTCAAGATGCTTGCAGCATGGATAATTCAACCATTTGGGTTGCCTCTTCTTCAGTATCAACACTTAATTTTGCACCACGTGTGATAGAGCATTCAGATCGATCCATGAATACGAGTTTACCGAAGCCATGCTGTCCTGGACCAAAAGGCGCCGATTCCTGGGAACTATACAATCTCTACGAGGATTTGGATTTGGGTCTTGAAACTTTTGAGGAACTATTTGGTGTAGCCAGGAAGCCCGAAGAGCTTCTGGAGAATGGTGGGATCGATAGCTTGTTCGGGAAAAAAGGCATATCTACTGTTGATTCCGATGGCCATGGTGCTGCTGCCACTGAGGTAATGCATTTACATGTGCTGAACTCAAATGTTCTTCTCAAGGAGTCGTCAGGCGCATTAGTGAATGCAATGCAGCCAGCAAGCAGCAATGCTGCATCTGCAGATTCCATCGTGAGTACTAAAACAGACTCAATTCTTTGTTGTAATTCAAGGCCAGCACTTTCAACCCTCTCGTTTTCTGGTCCCACCGGAGAAACTAGTAGTGGAGGTCATCAGGATTGCGAAGTCTCACCAATGATCTTAATGGGAGAACCTCCGTGGGGTCAACTGTGTCCCGAGACTCCCTGTCCATCTGGTAATCGTAGTAATGCTGTTATGCGATACATTGAAAAGAAAAAAATGCGCAAGTTTGAGAAAAAAGTTAGGTATGAATCTCGAAAAGCAAGGGCTGACGGGAGGAGCCGGGCCAAAGGACGGTTTGTCAAAGCTGGATATGCTCACGATTATGATCCATTGTGCAAAACCAGAAGCTATTAA | 1227 | 44.66 | MGYICDFCRYQRSMVYCRSDAACLCLSCDRKVHSANALSRRHTRSLLCEKCNLQPALVRCVEEGISLCQNCDWMCHNTSTSSCHQKETINCYAGCPSASELSSIWSFFIDLPTVGDDCEQELGLMRITENGGHPANNAAQDACSMDNSTIWVASSSVSTLNFAPRVIEHSDRSMNTSLPKPCCPGPKGADSWELYNLYEDLDLGLETFEELFGVARKPEELLENGGIDSLFGKKGISTVDSDGHGAAATEVMHLHVLNSNVLLKESSGALVNAMQPASSNAASADSIVSTKTDSILCCNSRPALSTLSFSGPTGETSSGGHQDCEVSPMILMGEPPWGQLCPETPCPSGNRSNAVMRYIEKKKMRKFEKKVRYESRKARADGRSRAKGRFVKAGYAHDYDPLCKTRSY | 408 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 4984289 | 4986284 | + | Bda027419.1 | Bda14g00661 | 20712 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda14g00661 | 408 | CDD | Bbox1_BBX-like | 4 | 47 | - | - | |
| Bda14g00661 | 408 | PANTHER | ZINC FINGER PROTEIN CONSTANS-LIKE 10 | 1 | 408 | - | - | |
| Bda14g00661 | 408 | ProSiteProfiles | Zinc finger B-box type profile. | 1 | 47 | IPR000315 | GO:0008270 | |
| Bda14g00661 | 408 | SMART | bboxneu5 | 4 | 47 | IPR000315 | GO:0008270 | |
| Bda14g00661 | 408 | ProSiteProfiles | Zinc finger B-box type profile. | 43 | 89 | IPR000315 | GO:0008270 | |
| Bda14g00661 | 408 | PANTHER | ZINC FINGER PROTEIN CONSTANS-LIKE 9-LIKE | 1 | 408 | - | - | |
| Bda14g00661 | 408 | Pfam | CCT motif | 351 | 393 | IPR010402 | GO:0005515 | |
| Bda14g00661 | 408 | ProSiteProfiles | CCT domain profile. | 351 | 393 | IPR010402 | GO:0005515 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda11g00378 | Bda-Chr11:4164682 | Bda14g00661 | Bda-Chr14:4984289 | 3.46E-08 | dispersed | |
| Bda13g00523 | Bda-Chr13:6300531 | Bda14g00661 | Bda-Chr14:4984289 | 5.19E-27 | dispersed | |
| Bda13g00639 | Bda-Chr13:7353320 | Bda14g00661 | Bda-Chr14:4984289 | 1.83E-09 | dispersed | |
| Bda14g00661 | Bda-Chr14:4984289 | Bda07g01539 | Bda-Chr7:28582137 | 1.06E-14 | dispersed | |
| Bda14g00661 | Bda-Chr14:4984289 | Bda13g00629 | Bda-Chr13:7283645 | 6.75E-65 | transposed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 17043 | PF06203 | CCT | 3.90E-15 | CL0281 | Bda | TR |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda14g00661 | - | - | jre:109000761 | 488.034 |