Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00663 ATGGGTTTGTCCAGTCTTCCTGCTCCATCCTCAGGAGTCCTCTGCATACTTATAATAAACACTGCCTTTTGCATTTCCATCTTCAAAGCCGTTCTTCAATCAATTCTTCAAGTCTTCGGCATTCAAATTTCATCGCCCTCTCCGCCACCACCTTCAATCTGGGTTGAAAACCTCTCAGAACCCATTGAGTTTCATCTCGATTCCTCGTACAATTATGTCGAGAAGTTCCGCGACCTTATTCCGGTGGTTCGGTTTGAAGAAGCACTAGCCTGTAAATTTTCAGAGCACGAATGCTCAGTTTGCCTCAATCAGTTTGAACCCAAATCAGAGATAAATCGCTTGTCTTGCGGCCATTTATTCCACAAAATGTGCTTGCAGAAGTGGTTGGCCTATTCGAATTTTAAGTGCCCTCTTTGCCGGATTCCTCTAATGGTGGAAGAAGAGAGACTTCATGCTTTTGATGAAGGTTTATCATATTCCTGTTAG 486 43.42 MGLSSLPAPSSGVLCILIINTAFCISIFKAVLQSILQVFGIQISSPSPPPPSIWVENLSEPIEFHLDSSYNYVEKFRDLIPVVRFEEALACKFSEHECSVCLNQFEPKSEINRLSCGHLFHKMCLQKWLAYSNFKCPLCRIPLMVEEERLHAFDEGLSYSC 161
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4991286 4991771 + Bda027421.1 Bda14g00663 20714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00663 161 Pfam Ring finger domain 97 140 IPR001841 -
Bda14g00663 161 PANTHER E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED 1 148 - -
Bda14g00663 161 SMART ring_2 98 139 IPR001841 -
Bda14g00663 161 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 144 IPR013083 -
Bda14g00663 161 SUPERFAMILY RING/U-box 81 145 - -
Bda14g00663 161 PANTHER - 1 148 IPR044249 -
Bda14g00663 161 ProSiteProfiles Zinc finger RING-type profile. 98 140 IPR001841 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00433 Bda14g00663 CCT
Bda13g00587 Bda14g00663 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00152 Bda-Chr11:1974447 Bda14g00663 Bda-Chr14:4991286 1.86E-13 dispersed
Bda13g00587 Bda-Chr13:6910938 Bda14g00663 Bda-Chr14:4991286 3.37E-45 dispersed
Bda14g00663 Bda-Chr14:4991286 Bda08g00511 Bda-Chr8:5180809 7.13E-15 dispersed
Bda14g00663 Bda-Chr14:4991286 Bda06g00433 Bda-Chr6:6408731 1.52E-48 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00663 K16285 - twl:119992309 189.119