Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00697 ATGGAACGTGGATCTAGTAGCAGCGGGAGCTCTTTTGTTGTAGGGTTTGGAGAAAACAGTTGCAGCACTGGGGGTGGGCTTTGTTCGACGGGGGCAGTGATGATGGCTCCGCCGATGAATAATTGCGGTGCAGAAATGGATCATAAGCTGTTTTTTCCTTTAGTCTGGAACAACTCTTCCGCTAATAGCTCTAATGGCGGCCAAAGGGTGACTACTTTATTTCCTCAAGATCGTAATCAAGGAGTTTCTTCTCTCATGGAGGTTAACAACGCTGACTGTCAAAACAACCCTTCCAACGGCTGTTATTTGAGAGCTAAGATTATGGGTCACCCTCTTTTTTCGAGACTCTTGAACTCATATGTCAACTGTCAGAAGGTTGGGGCTCCGCCTGAAGTGCTGGCTGGGTTAGAGGAGGTCTGTGCTTCATACAATGCTACATCGGCTGGGGGCGATGGAAGGCCGTCGGAGACTGCAAGCTGTGTAGGAGAAGACCCTGCATTGGACCAGTTTATGGAAGCTTACTGTGAGATGCTGGCTAAATATGAGCAAGAGCTCACTAAACCCTTCAAAGAAGCCATGCTTTTCTTCTCTAGAATTGAGTCTCAACTGAAGGCCTTGGAAGTTTCTTCCGCCTGTAGGTTTGGAACTTCCAAGGAAGAAGAGGTTCATGTCGAAGACAATTATATTGATCCCGAAGCTGAGGATAAAGATCTCAAACTTCAGCTTTTACGCAAGTACAGCGGATGTCTCGGCAGTCTTAAGAAAGAATTTCTGAAGAAGAAGAAGAACGGCAAGTTGCCGAAGGAAGCCCGGCAAAAACTGCTAGACTGGTGGACTAAACATTACAAATGGCCTTACCCCTCGGAGGGGCAGAAGGTGGCATTGTCGAATTCAACTGGTCTCGATCTGAAGCAGATCAACAACTGGTTTATAAACCAAAGGAAGCGCCATTGGAGGCCGTCTGATGATATGCAATTTGTGGTGATGGACGGTGATCATCCCCCCCATTTCTACATGGATAGTATCATCTCCAATCCTTTCGCACTCGACTGCCCGTCGTCTCTTCTTTGA 1071 47.25 MERGSSSSGSSFVVGFGENSCSTGGGLCSTGAVMMAPPMNNCGAEMDHKLFFPLVWNNSSANSSNGGQRVTTLFPQDRNQGVSSLMEVNNADCQNNPSNGCYLRAKIMGHPLFSRLLNSYVNCQKVGAPPEVLAGLEEVCASYNATSAGGDGRPSETASCVGEDPALDQFMEAYCEMLAKYEQELTKPFKEAMLFFSRIESQLKALEVSSACRFGTSKEEEVHVEDNYIDPEAEDKDLKLQLLRKYSGCLGSLKKEFLKKKKNGKLPKEARQKLLDWWTKHYKWPYPSEGQKVALSNSTGLDLKQINNWFINQRKRHWRPSDDMQFVVMDGDHPPHFYMDSIISNPFALDCPSSLL 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5191751 5193996 + Bda027456.1 Bda14g00697 20748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00697 356 SMART ELK_2 237 258 IPR005539 GO:0003677
Bda14g00697 356 Gene3D - 262 324 - -
Bda14g00697 356 SMART KNOX1_2 101 145 IPR005540 GO:0003677|GO:0005634
Bda14g00697 356 Pfam Homeobox KN domain 277 316 IPR008422 GO:0003677|GO:0006355
Bda14g00697 356 Pfam KNOX2 domain 160 206 IPR005541 GO:0003677|GO:0005634
Bda14g00697 356 ProSiteProfiles ELK domain profile. 237 257 IPR005539 GO:0003677
Bda14g00697 356 SUPERFAMILY Homeodomain-like 259 336 IPR009057 -
Bda14g00697 356 Pfam ELK domain 237 258 IPR005539 GO:0003677
Bda14g00697 356 ProSiteProfiles 'Homeobox' domain profile. 257 320 IPR001356 GO:0003677
Bda14g00697 356 CDD homeodomain 269 321 IPR001356 GO:0003677
Bda14g00697 356 ProSitePatterns 'Homeobox' domain signature. 295 318 IPR017970 GO:0000981|GO:0006355
Bda14g00697 356 Pfam KNOX1 domain 103 141 IPR005540 GO:0003677|GO:0005634
Bda14g00697 356 SMART KNOX2_2 157 208 IPR005541 GO:0003677|GO:0005634
Bda14g00697 356 SMART HOX_1 259 324 IPR001356 GO:0003677
Bda14g00697 356 PANTHER HOMEOBOX PROTEIN SBH1-LIKE ISOFORM X1 3 346 - -
Bda14g00697 356 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 3 346 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00003 Bda-Chr1:279462 Bda14g00697 Bda-Chr14:5191751 0 dispersed
Bda02g00923 Bda-Chr2:49460823 Bda14g00697 Bda-Chr14:5191751 1.73E-108 dispersed
Bda14g00697 Bda-Chr14:5191751 Bda15g00550 Bda-Chr15:8647777 4.15E-77 dispersed
Bda14g00697 Bda-Chr14:5191751 Bda09g01593 Bda-Chr9:47367375 8.51E-119 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17046 PF03791 KNOX2 6.70E-22 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00697 - - qsu:112032307 374.015