Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00713 ATGCCAGCCGGGTTCATGATTCCGCCGAGGAATACGCCGCCCATGATTGGAAGGAACGCTAATGGAGGTGGATTTGGATCGTCTTCTGGCCTTAACCTTGGTCAGCTTAACATGTTGGAGGGACATCTCCACCCGCTGGACATGACCAACAACACTTCCGATAGTGATCTTGTCCGACTCCGAGGAGATGACGATTTCGACAGCGCCACCAAATCAAGCAGCGAAAACCTTGAGGTTTTCTCTGGCGACGACCAAGACCCACGACCTAAAAAGAAGCGATACCATCGCCACACCCAGCTTCAGATCCAACAAATGGAAGCTTTCTTCAAGGAATGCCCACATCCAGATGATAAGCAAAGGAAGGAGTTGAGCCGGGAATTAAACCTGGAGCCATTGCAAGTCAAATTTTGGTTCCAAAACAAACGTACTCAAATGAAGACCCAACACGAACGCCATGAAAATACACATCTCCGGACCGAAAATGACAAGCTTCGAGGAGATAACATGAGGTATCGAGAAGCTCTGAGTAACGCTTCATGTCCCAACTGTGGAGGCCCAACCGCCGTTGGAGAGATGTCCTTCGATGAACATCATCTCAGACTTGAAAACGCCAGATTACGAGAAGAGATCGATCGCATGTCAGCAATAGCAGCCAAATATGTTGGCAAACCAGTGATGAACTTCCCACTTTTATCTCCACCTGTTCCATCACGTCCGCTTGAACTAGATATGGGAAACTTCGGAGGTCAGCCAGTGATAGGCGCTGACATGTATGTTGCTGGAGACATGCTCCGTTCTACGGGTGCTCCGACGGAGGCTGAAAAACCCATAATAATCGAGCTTGCGGTGGCGGCTATGGAAGAACTGATCAGAATGGCGCAGATGGGAGAACCCTTATGGATTTCTGGCCTTGATGGATCGACCGTTATGCTTAATGAAGAGGAATACATGAGAACATTTAGCAGAGGGATTGGACCAAAACCCGCTGGATTTAAATGCGAAGCCTCTAGAGAAACTGTTCTCGTTATTATGAACCATGTTAACCTCGTTGAGATACTTATGGACGTGAATCAATGGTCAACTGTGTTTTCTGGAATTGTCTCGAGAGCTGCGACGCTGGGGGTTTTGTCAACAGGAGTTGCAGGAAACTACAACGGAGCACTACAAGTGATGACATCAGAATTTCAAGTTCCTTCGCCACTTGTTCCAACCCGAGAGAGTTATTACGTAAGGTATTGTAAACAGCATGGAGATGGAACATGGGTAGTAGTGGATGTTTCTATAGACCATTTACGACCGAATCTTCCATTGCGATGCCGAAAAAGGGCTTCTGGTTGCTTGATTCAAGAAATGCCGAATGGATATTCAAAGGTTACTTGGGTTGAGCACGTCGAGGTGGATGATAGAGGCGTTCATAGTCTGTACAAACAACTTGTTAATTCTGGTCATGCTTTCGGGGCCAAACGTTGGGTCGCCACCTTAGATCGACAGTGCGAAAGACTCGCCAGCGCAATGGCAACGGGCATTCCCAACGGCGATGCTGGTGTGATAACAAATCAAGAAGGCCGAAAGAGCATGCTAAAGTTAGCCGAGAGGATGGTGATAAGCTTCTGCGCTGGAGTGAGCGCCTCCACGGCTCATACGTGGACGACATTGTCCGGGACGGGGGCCGATGATGTTAGGGTTATGACTCGTAAGAGTGTAAACGATCCCGGTAGGCCTCCTGGCATCGTGCTAAGTGCGGCTACTTCATTCTGGCTTCCTGTCCCTCCTAAAAGAGTGTTCAATTTTCTCCGGGACGAGAACTCAAGAACCGAGTGGGACATTCTTTCAAATGGAGGAGTCGTTCAGGAGATGGCACATATCGCCAACGGACGCGACACCGGCAATTGCGTCTCGTTGCTTCGAGTAAATAGCGCAAATTCAAGCCAGAGCAACATGCTGATATTACAAGAAAGTTCAACAGACCCAACAGGCTCTTTTGTGATATATGCTCCCGTTGATATAGTTGCGATGAACGTGGTACTAAATGGTGGAGACCCAGATTATGTGGCCCTTCTTCCTTCGGGATTTGCTATTCTTCCCGATGGAACAGGATCAAACGGTGGAAATGTAACAGACGGCGGGGCCGGTGGGTCACTCTTAAGCGTTGCCTTTCAGATTTTGGTTGATTCTGTCCCTACCGCAAAACTCTCTCTTGGGTCAGTCACCACGGTCAACAATCTCATTGCTTGCACTGTTGAGAGGATCAAGGCCGCATTGTCGACCGAGAATGCTTGA 2280 48.55 MPAGFMIPPRNTPPMIGRNANGGGFGSSSGLNLGQLNMLEGHLHPLDMTNNTSDSDLVRLRGDDDFDSATKSSSENLEVFSGDDQDPRPKKKRYHRHTQLQIQQMEAFFKECPHPDDKQRKELSRELNLEPLQVKFWFQNKRTQMKTQHERHENTHLRTENDKLRGDNMRYREALSNASCPNCGGPTAVGEMSFDEHHLRLENARLREEIDRMSAIAAKYVGKPVMNFPLLSPPVPSRPLELDMGNFGGQPVIGADMYVAGDMLRSTGAPTEAEKPIIIELAVAAMEELIRMAQMGEPLWISGLDGSTVMLNEEEYMRTFSRGIGPKPAGFKCEASRETVLVIMNHVNLVEILMDVNQWSTVFSGIVSRAATLGVLSTGVAGNYNGALQVMTSEFQVPSPLVPTRESYYVRYCKQHGDGTWVVVDVSIDHLRPNLPLRCRKRASGCLIQEMPNGYSKVTWVEHVEVDDRGVHSLYKQLVNSGHAFGAKRWVATLDRQCERLASAMATGIPNGDAGVITNQEGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVNDPGRPPGIVLSAATSFWLPVPPKRVFNFLRDENSRTEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESSTDPTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTGSNGGNVTDGGAGGSLLSVAFQILVDSVPTAKLSLGSVTTVNNLIACTVERIKAALSTENA 759
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5378449 5382639 + Bda027476.1 Bda14g00713 20764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00713 759 Pfam Homeodomain 91 146 IPR001356 GO:0003677
Bda14g00713 759 CDD homeodomain 91 149 IPR001356 GO:0003677
Bda14g00713 759 CDD START_ArGLABRA2_like 275 499 - -
Bda14g00713 759 Pfam START domain 281 500 IPR002913 GO:0008289
Bda14g00713 759 MobiDBLite consensus disorder prediction 67 97 - -
Bda14g00713 759 ProSiteProfiles START domain profile. 271 503 IPR002913 GO:0008289
Bda14g00713 759 Gene3D - 80 164 - -
Bda14g00713 759 SMART START_1 280 500 IPR002913 GO:0008289
Bda14g00713 759 SUPERFAMILY Homeodomain-like 76 148 IPR009057 -
Bda14g00713 759 ProSitePatterns 'Homeobox' domain signature. 123 146 IPR017970 GO:0000981|GO:0006355
Bda14g00713 759 MobiDBLite consensus disorder prediction 1 23 - -
Bda14g00713 759 SUPERFAMILY Bet v1-like 519 751 - -
Bda14g00713 759 ProSiteProfiles 'Homeobox' domain profile. 88 148 IPR001356 GO:0003677
Bda14g00713 759 Gene3D - 346 499 IPR023393 -
Bda14g00713 759 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 46 756 - -
Bda14g00713 759 SUPERFAMILY Bet v1-like 271 502 - -
Bda14g00713 759 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 46 756 IPR042160 -
Bda14g00713 759 SMART HOX_1 89 152 IPR001356 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00361 Bda14g00713 CCT
Bda13g00620 Bda14g00713 CCT
Bda06g00361 Bda14g00713 ECH
Bda13g00620 Bda14g00713 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00850 Bda-Chr6:11749222 Bda14g00713 Bda-Chr14:5378449 5.34E-167 dispersed
Bda09g01621 Bda-Chr9:47661971 Bda14g00713 Bda-Chr14:5378449 0 dispersed
Bda01g01106 Bda-Chr1:45888152 Bda14g00713 Bda-Chr14:5378449 6.26E-178 transposed
Bda08g00354 Bda-Chr8:3621138 Bda14g00713 Bda-Chr14:5378449 1.00E-34 transposed
Bda09g00755 Bda-Chr9:13423733 Bda14g00713 Bda-Chr14:5378449 0 transposed
Bda11g00288 Bda-Chr11:3291076 Bda14g00713 Bda-Chr14:5378449 0 transposed
Bda13g00333 Bda-Chr13:4230213 Bda14g00713 Bda-Chr14:5378449 0 transposed
Bda14g00735 Bda-Chr14:5609503 Bda14g00713 Bda-Chr14:5378449 0 transposed
Bda13g00620 Bda-Chr13:7230664 Bda14g00713 Bda-Chr14:5378449 0 wgd
Bda14g00713 Bda-Chr14:5378449 Bda06g00361 Bda-Chr6:5812678 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17047 PF01852 START 2.70E-58 CL0209 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00713 K09338 - pvy:116111208 1283.47