Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00770 TCAGCTATGGCAGCGTCGTCTGCATGCCTTGTGGGGAATGGGTTGTCTAACCACTGTACTAAAACTAGCCCGAGTAAGGATTTCTTTGGCAGGCGTCTTTCCCCCTATTTGAATCTTCCATCACTGGCTAAGGTTGCTAAAGCAGCTGCTCCTGAATTGGGTAATCGGGTGCAGAGAGTTCGAGTGCAGTTGCCAGGTCTTAGCCAAGAACTCCTCCAGAAGGGAGGCATGGGCGGCCCCGGTGGGCCTGGCTTCCCTCTTACCTTTGGTCAATCTAAAGCCAAGTTTCAAATGGAACCAAATACTGGTGTGACATTTGATGATGTTGCTGGAGTTGATGAAGCTAAGCAGGACTTTATGGAGGTGGTGGAGTTTCTTAAGAAACCCGAAAGGTTCACTGCAGTCGGAGCTCGAATTCCAAAAGGTGTTCTTCTAATTGGCCCCCCTGGAACTGGAAAGACTCTACTAGCTAAAGCAATTGCTGGAGAAGCTGGGGTTCCATTTTTCTCTATCTCGGGTTCTGAATTCGTTGAGATGTTTGTTGGTGTTGGTGCATCTCGAGTTCGGGATCTTTTCAAGAAAGCCAAGGAGAATGCTCCTTGCATTGTTTTTGTCGATGAAATCGATGCTGTTGGAAGGCAAAGAGGAACTGGTATTGGTGGAGGGAATGACGAACGAGAGCAAACCCTTAATCAACTGCTGACTGAAATGGACGGGTTTGAAGGTAATACTGGGATCATTGTCATTGCCGCCACTAACAGGGCAGATATTTTGGACTCGGCCTTGCTAAGACCTGGGCGATTTGACAGACAGGTGACTGTTGATGTTCCAGATGTTCGAGGAAGAACAGAAATCTTGAAGGTTCATGGAGGGAATAAGAAGTTTGATGGGGATGTTTCCCTTGATGTCATTGCCATGAGAACGCCTGGTTTCAGTGGAGCAGATCTTGCAAACCTTTTGAATGAGGCAGCTATATTGGCTGGTCGACGCGGGAAAACAGCAATCTCGTCCAAGGAGATTGATGATTCAATTGATCGGATTGTGCTCATATCAAAGCAGCAACTCTTTGTTTTGCATGTATGTTTGCAGATGGTAACAACGTTTGGAATGTCGGAAATTGGCCCGTGGTCCCTTATGGACTCAGGTGCTCAGAGTGCTGATGTCATCATGAGGATGATGGCTAGGAACTCCATGTCGGAAAAGCTTGCCGAAGACATTGATAGTGGATCAGCTCTTCCATCGAAAGGCCGGACGATTAATATTGAAGAAGATTCATCTGTTTTTAAGAGGTTTGGATGCTGCTCCAACTGA 1311 46.91 SAMAASSACLVGNGLSNHCTKTSPSKDFFGRRLSPYLNLPSLAKVAKAAAPELGNRVQRVRVQLPGLSQELLQKGGMGGPGGPGFPLTFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDVRGRTEILKVHGGNKKFDGDVSLDVIAMRTPGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSIDRIVLISKQQLFVLHVCLQMVTTFGMSEIGPWSLMDSGAQSADVIMRMMARNSMSEKLAEDIDSGSALPSKGRTINIEEDSSVFKRFGCCSN 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5886505 5895338 + Bda027532.1 Bda14g00770 20821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00770 436 Pfam AAA+ lid domain 298 341 IPR041569 -
Bda14g00770 436 TIGRFAM FtsH_fam: ATP-dependent metallopeptidase HflB 79 351 IPR005936 GO:0004176|GO:0004222|GO:0016020
Bda14g00770 436 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 2, CHLOROPLASTIC 75 348 - -
Bda14g00770 436 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 2, CHLOROPLASTIC 360 409 - -
Bda14g00770 436 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 2, CHLOROPLASTIC 45 74 - -
Bda14g00770 436 SMART AAA_5 139 278 IPR003593 -
Bda14g00770 436 ProSitePatterns AAA-protein family signature. 246 264 IPR003960 GO:0005524|GO:0016887
Bda14g00770 436 Gene3D - 277 355 - -
Bda14g00770 436 CDD AAA 118 275 - -
Bda14g00770 436 Gene3D - 94 276 IPR027417 -
Bda14g00770 436 PANTHER METALLOPROTEASE M41 FTSH 360 409 - -
Bda14g00770 436 PANTHER METALLOPROTEASE M41 FTSH 45 74 - -
Bda14g00770 436 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 346 IPR027417 -
Bda14g00770 436 PANTHER METALLOPROTEASE M41 FTSH 75 348 - -
Bda14g00770 436 Pfam ATPase family associated with various cellular activities (AAA) 143 274 IPR003959 GO:0005524|GO:0016887
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda14g00770 Bda15g00966 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00770 Bda-Chr14:5886505 Bda15g00894 Bda-Chr15:14633062 5.60E-13 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00770 K03798 - vvi:100250511 532.332