Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda14g00785 | CCAATGGGAGTCAAGCTCTCGCTCTTTTTCTCTCTCCTCATCGTGTCTCTCCTTACTCCCCACGTCCTCTCCTCCCCAGTTAAGGACCCAGAGCTCGTAGTACAGCAAGTACACAGAAGCATCAATGCCTCCAGGCGGAGCCTTGGCTACCTCTCCTGCGGCACCGGAAACCCTATCGACGACTGCTGGCGGTGTGACCCCAACTGGGAGAAGAATCGACAGCGCCTAGCCGATTGCGCAATCGGGTTCGGTAAAAACGCCGTCGGAGGCCGCGACGGTTTGATCTACGTAGTTACTGACGATGGCGACGATGATCCAGTGAATCCGAAACCCGGTACGCTCCGATACGCAGTGATTCAAGACGAACCGCTCTGGATAATTTTCGCCAGGGACATGGGGATAAAACTGAAAGAAGAACTGATAATGAATTCTTTCAAAACCATCGACGGGAGAGGGGCCGACGTCCATATTTCTGGGGGACCTTGCATTACGATACAGTACGTGACAAATATTATAATCCACGGTCTCCATATCCACGACTGTAAGCAAGCGGGGAATGCTTACGTGCGGGACTCCCCACATCACTATGGGTGGAGAACTGAATCGGACGGAGATGGGGTTTCAATCTTCGGTGGTAGCCATGTTTGGGTCGATCATTGCTCTTTGTCGAACTGTAACGACGGCCTGATCGATGCGATTCATGGATCTACGGCGATTACGATTTCAAATAATTATATGACACATCATGATAAGGTAATGTTGTTAGGTCACAGCGATTCATACAGCCAAGACAAGAACATGCAGGTCACCATTGCCTTTAATCACTTTGGAGAAGGCCTAATACAAAGAATGCCCAGGTGTAGGCATGGGTATTTTCATGTGGTCAACAACGACTACACCCATTGGGAAATGTATGCCATTGGAGGGAGCGCAGCCCCTACGATCAATAGCCAAGGCAACCGATTTGTTGCCCCAGACGACAGATTCAATAAAGAGGTGACGAAGCGTGAGGATGCACCGGAGAGCGAATGGAAGGGATGGCATTGGAGGTCAGAGGGAGACCTGATGTTAAACGGTGCGTTTTTCACGGCATCTGGGGCCGGAGCTTCTTCAAGCTATGCTAAAGCTTCGAGCTTGGGTGCTAGGCCATCTACCCTAGTTGGTTCCATTACAGTCGGCGCTGGTGCACTCGATTGCAAGAAGGGCTCGCGCTGCTGA | 1218 | 51.15 | PMGVKLSLFFSLLIVSLLTPHVLSSPVKDPELVVQQVHRSINASRRSLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGLIYVVTDDGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMGIKLKEELIMNSFKTIDGRGADVHISGGPCITIQYVTNIIIHGLHIHDCKQAGNAYVRDSPHHYGWRTESDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYSQDKNMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFNKEVTKREDAPESEWKGWHWRSEGDLMLNGAFFTASGAGASSSYAKASSLGARPSTLVGSITVGAGALDCKKGSRC | 405 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 6062290 | 6063805 | + | Bda027552.1 | Bda14g00785 | 20836 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda14g00785 | 405 | Gene3D | - | 56 | 398 | IPR012334 | - | |
| Bda14g00785 | 405 | SMART | amb_all | 131 | 328 | IPR002022 | - | |
| Bda14g00785 | 405 | PRINTS | Pollen allergen Amb family signature | 203 | 224 | IPR018082 | - | |
| Bda14g00785 | 405 | PRINTS | Pollen allergen Amb family signature | 103 | 128 | IPR018082 | - | |
| Bda14g00785 | 405 | PRINTS | Pollen allergen Amb family signature | 139 | 155 | IPR018082 | - | |
| Bda14g00785 | 405 | PRINTS | Pollen allergen Amb family signature | 347 | 371 | IPR018082 | - | |
| Bda14g00785 | 405 | PRINTS | Pollen allergen Amb family signature | 79 | 96 | IPR018082 | - | |
| Bda14g00785 | 405 | PRINTS | Pollen allergen Amb family signature | 305 | 324 | IPR018082 | - | |
| Bda14g00785 | 405 | PRINTS | Pollen allergen Amb family signature | 376 | 399 | IPR018082 | - | |
| Bda14g00785 | 405 | PRINTS | Pollen allergen Amb family signature | 283 | 302 | IPR018082 | - | |
| Bda14g00785 | 405 | PANTHER | PECTATE LYASE 18-RELATED | 12 | 402 | IPR045032 | GO:0030570 | |
| Bda14g00785 | 405 | PANTHER | PECTATE LYASE | 12 | 402 | - | - | |
| Bda14g00785 | 405 | SUPERFAMILY | Pectin lyase-like | 42 | 397 | IPR011050 | - | |
| Bda14g00785 | 405 | Pfam | Pectate lyase | 137 | 322 | IPR002022 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda02g00603 | Bda-Chr2:46877864 | Bda14g00785 | Bda-Chr14:6062290 | 0 | dispersed | |
| Bda03g00722 | Bda-Chr3:6094621 | Bda14g00785 | Bda-Chr14:6062290 | 0 | dispersed | |
| Bda05g00882 | Bda-Chr5:57283467 | Bda14g00785 | Bda-Chr14:6062290 | 0 | dispersed | |
| Bda09g01316 | Bda-Chr9:44937624 | Bda14g00785 | Bda-Chr14:6062290 | 0 | dispersed | |
| Bda13g00026 | Bda-Chr13:467230 | Bda14g00785 | Bda-Chr14:6062290 | 0 | dispersed | |
| Bda14g00053 | Bda-Chr14:450586 | Bda14g00785 | Bda-Chr14:6062290 | 1.34E-172 | dispersed | |
| Bda14g00785 | Bda-Chr14:6062290 | Bda14g00790 | Bda-Chr14:6120551 | 0 | proximal | |
| Bda11g01630 | Bda-Chr11:50028723 | Bda14g00785 | Bda-Chr14:6062290 | 4.43E-25 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda14g00785 | K01728 | - | pop:7453817 | 720.694 |