Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00811 ATGGCTGGACCTAAAGAAGACGATAAAATTGATGGGATAGGGAGAGAGGAGCAAAGTGAGTTGAGAAACCAGTATATCGACAAAGAGGGCAGTCTATCTCTTGACAGGGACATGCCTCTGCATGCCGGAAACTCCATTCACCGGTCCAGTTCTCGGCCACAGCTAGACCTTAGTAAAGCTGAAATTCAGGGGAATTTCGAAGAGAGAGACCCTACAATTCTCCTTCCTAATCAGTCGGATGATCTATCTCACCTGGCTCTAGACATTGGAGGATCTCTTATCAAGTTGGTGTATTTTTCAAGACGTGAGGACCAATCAGTCAAAGATAAGAGGAAAAAAATCGTGAAAGATAGATTGGATGTCTCAAACGGTAGTAGAAGAAACTATCCAATTCTTGGCGGGAGGCTTCATTTTGTGAAATTCGAGACTAGCAAGATCAATGAGTGCTTAGACTTCATTTATTCCAAGCAGCTCCACCGTTTACTGTGGTATCAACTTGGCTGTTGTGAAAAGGCTACAGGTGGTGGGGCATATAAGTTTGCAGATCTTTTTAAAGAAAAACTCGGGGTTAGTCTTGACAAAGAAGATGAAATGGATTGCCTCGTGGCGGGAGCAAACTTTTTGCTTAAGGCAATTCGTCATGAAGCTTTCACTCATATGGAGGGTAAGAAAGAATTTGTGCAACTTGACTATAACGAGATGTTTCCTTATCTTCTCGTTAATATTGGATCGGGAGTTAGTATGATCAAGGTTGATGGAGATGGAAGATTTGAGCGGGTTAGTGGGACGAATGTTGGAGGTGGAACTTACTGGGGCCTCGGAAGGCTGTTAACCAAATGCAAGAATTTTGATGAGTTGCTAGAGTTAAGTCAAAGGGGAGATAATAGAACCATAGACATGCTTGTTGGGGACATTTATGGCGGGACAGACTATTCTAAGATCGGCCTTTCGGCATCAACTATTGCCTCTAGTTTTGGCAAGGCCATTTCAGAAAATAAGGAACTTGAAGACTACAGACCAGAAGACATCTCTCTATCTCTCTTACGAATGATTTCATATAATATTGGCCAGGTATCATATTTGAATGCATTAAGATTTGGGCTCAAGCGGATTTTTTTTGGAGGATTTTTTATAAGGGGTCATGCTTATACTATGGACACAATCTCTTTTGCAATTCATTTTTGGTCAAAAGGAGAGGCGCAAGCTATGTTCCTACGGCATGAAGGATTTCTGGGAGCCTTAGGTGCATTCATGAGTTATGAAAAGCATGGTCTTGATGACTTGATGGTCCATCAGTTGGTTGAGAGATTTCCAATGGGTGCACCTTACACAGGAGGAAAGATTCATGGTCCTCCCCTTGTGGATCTAAATGAAAAGGCAAGTGATATTTCTTGGATGGAGAAGTTTATCCAGAAGGGAACGGAGATTACTGCTCCTGTACCCATGGCCCCTTCAGCAACTACTGGACTTGGAGGCTTTGAAGTCCCTTGGTCTAAAGGAAATGTCCTGCGTTCTGATGCAAGCGCGTTAAATGTTGGTGTGCTTCATCTTGTACCAACTTTGGACGTGTTTCCTTTACTGGCAGATCCAAAAACGTATGAACCTAACACTATTGATCTCGCTGACCACAGTGAATTAGAGTATTGGTTTACTGTACTGTCAGGGCATTTACCAGACCTTGCGGTGGCAAGTGAAGGTGGAACCGATGATGCTAAGAGAAGAGGCGACGCTTTTGCACGTGCATTTTCCGCACACTTGAGAAGGTTGATGGAAGAACCTGCAGCATATGGAAAGTTAGGGTTGGCAAATTTGTTGGAGCTGAGGGAGGAGTGCTTGAGGGAGTTCCAATTTGTTGACGCCTACAGAAGCATAAAACAGAGGGAGAATGAAGCCTCACTGACTGTGTTACCTGACCTGCTGATGGAGCTTGACTGTATGCGTGAGGAAACAAGACTCCTTATGCTAATTGAAGGTGTTCTAGCTGCAAATATCTTTGACTGGGGATCCCGTGCTTGTGTGGATCTCTATCACAAAGGAACAATTATCGAAATATATAGAATGAGCAGAAATAAAATGCAAAGACCATGGCGGGTAGATGATTTTGATGTATTCAGAAAGGTTGTTTTGGTTGCCAACTCGCTTCCTGCTCTAAACGATGTAACTGCTTTGGAGCTTCCTGACATTGTAGCTGAGGCTGCCAAGCACTGTGACATACTTCGAAAAGCTGCAGTAGCAGGAGGATTAATTGTGGATGCAATGATTAACACCTCGGAGGGTTCTAAAGAATATTCATCGTACGTCCCATTAATGGTCGTGGAGAATGGATGTGGAAGTCCATGCATTGACTTAAGGCAGGTCAGCTCCGACCTGGCTGCTGCTGCAAAAGACGCCGATTTGATAATCTTGGAAGGAATGGGCAGGTCTCTTCACACAAACTTCAATGCACATTTCAAATGCGATGCATTAAAGCTTGCAATGGTTAAAAATCAGAGATTGGCAGAAAAGTTGATTAAAGGAAACATATATGACTGTGTTTGTCGATACGAGCCTGCCGGAAACCCGGACGATAAGTAG 2574 43.43 MAGPKEDDKIDGIGREEQSELRNQYIDKEGSLSLDRDMPLHAGNSIHRSSSRPQLDLSKAEIQGNFEERDPTILLPNQSDDLSHLALDIGGSLIKLVYFSRREDQSVKDKRKKIVKDRLDVSNGSRRNYPILGGRLHFVKFETSKINECLDFIYSKQLHRLLWYQLGCCEKATGGGAYKFADLFKEKLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGKKEFVQLDYNEMFPYLLVNIGSGVSMIKVDGDGRFERVSGTNVGGGTYWGLGRLLTKCKNFDELLELSQRGDNRTIDMLVGDIYGGTDYSKIGLSASTIASSFGKAISENKELEDYRPEDISLSLLRMISYNIGQVSYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAIHFWSKGEAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLVDLNEKASDISWMEKFIQKGTEITAPVPMAPSATTGLGGFEVPWSKGNVLRSDASALNVGVLHLVPTLDVFPLLADPKTYEPNTIDLADHSELEYWFTVLSGHLPDLAVASEGGTDDAKRRGDAFARAFSAHLRRLMEEPAAYGKLGLANLLELREECLREFQFVDAYRSIKQRENEASLTVLPDLLMELDCMREETRLLMLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMQRPWRVDDFDVFRKVVLVANSLPALNDVTALELPDIVAEAAKHCDILRKAAVAGGLIVDAMINTSEGSKEYSSYVPLMVVENGCGSPCIDLRQVSSDLAAAAKDADLIILEGMGRSLHTNFNAHFKCDALKLAMVKNQRLAEKLIKGNIYDCVCRYEPAGNPDDK 857
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6246584 6257222 + Bda027580.1 Bda14g00811 20862

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00811 857 SUPERFAMILY Actin-like ATPase domain 83 215 IPR043129 -
Bda14g00811 857 MobiDBLite consensus disorder prediction 1 35 - -
Bda14g00811 857 PANTHER PANTOTHENATE KINASE 2 706 774 - -
Bda14g00811 857 PANTHER PANTOTHENATE KINASE 2 33 666 - -
Bda14g00811 857 SUPERFAMILY Actin-like ATPase domain 187 420 IPR043129 -
Bda14g00811 857 TIGRFAM panK_eukar: pantothenate kinase 84 419 IPR004567 GO:0004594|GO:0005524|GO:0015937
Bda14g00811 857 Gene3D - 76 228 - -
Bda14g00811 857 MobiDBLite consensus disorder prediction 1 55 - -
Bda14g00811 857 Gene3D - 536 618 IPR035073 -
Bda14g00811 857 Pfam Damage-control phosphatase ARMT1-like domain 706 838 IPR002791 -
Bda14g00811 857 Pfam Damage-control phosphatase ARMT1-like domain 604 706 IPR002791 -
Bda14g00811 857 PIRSF PanK_long 705 853 IPR015844 GO:0004594|GO:0015937
Bda14g00811 857 PIRSF PanK_long 38 707 IPR015844 GO:0004594|GO:0015937
Bda14g00811 857 Pfam Fumble 84 418 IPR004567 GO:0004594|GO:0005524|GO:0015937
Bda14g00811 857 Gene3D - 299 409 - -
Bda14g00811 857 PANTHER PANTOTHENATE KINASE 706 774 IPR004567 GO:0004594|GO:0005524|GO:0015937
Bda14g00811 857 PANTHER PANTOTHENATE KINASE 33 666 IPR004567 GO:0004594|GO:0005524|GO:0015937
Bda14g00811 857 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 701 850 - -
Bda14g00811 857 SUPERFAMILY AF1104-like 515 850 IPR036075 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00811 K24265 PANK4; bifunctional damage-control phosphatase, subfamily II, fusion protein - csv:101203117 1399.8
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01619 Bda-Chr7:30094438 Bda14g00811 Bda-Chr14:6246584 5.87E-155 dispersed
Bda10g01028 Bda-Chr10:44404778 Bda14g00811 Bda-Chr14:6246584 8.11E-123 dispersed
Bda14g00811 Bda-Chr14:6246584 Bda07g01607 Bda-Chr7:29756123 2.78E-179 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g757 Blo04g00734 . . . . . . . . Cmo18g00128 . . . . . . . . . . . . . . . . . . . . . . Cone16ag0101 Cone13ag0142 . Lsi02g00371 Csa01g00852 Chy12g01267 Cme12g01694 . . . Bda14g00811 . Bpe15g00638 Bma03g00781 . . . . . Cma18g00170 . Car18g00161 Cpe09g01025 . Bhi08g01609 Tan05g2008 . Lac10g0449 Hepe07g2227 . . Cla01g01300 Cam01g1429 Cec01g1464 Cco01g1460 Clacu01g1366 Cmu01g1272 Cre01g1264 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005817 1 5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 3 3 1 39
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda14g00811 Bda_Chr14 FPKM 48.680161 50.412144 8.026587 9.395681 1.849063 1.644504 1.902002 143.912888 139.634003