Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00825 ATGGCGGCGAATTCTTCGTCTTCTACTTTGCCTGAATCTTCTTTCTCCAGGCACCACGCCTATAGCAGGAAGCAGAAGTCGCTCGGTCTTCTATGCTCAAATTTCCTGAGCTTGTATAATCGCGATGGCATCCACTCGATCGGTCTGGATGATGCTGCCTCGCGATTAGTTTTTGTGAAATTCACAGGTGTTGAGAGAAGGCGGATCTATGATATTGTAAACGTCCTGGAAAGTGTTTTAGCGAGGAGGGCAAAGAATCAATACAGCTGGAAAGGATTTGAAGCTATTCCTGTCGCCTTACAGCACCTCAAGGAAGAGGGATTGAAGGAAAATTTCAATGCATCTGATGGTAACGACTATGCAAAAGCATCAGATGACGAAGATGAAGATGACACATTATCAAATCCTGCAACCGGAAGCCAAAACTCAATTTCTTCGCTGCCCAAACATTCTTCGTCTAAATCAGACAACAGAAGGGAGAAGTCTTTGGCCCTTCTTACTCGAAATTTTGTCAAGCTGTTTATCTGCTCTAAAGTGGATCTCATCTCTCTTGATGAAGCTGCAAGGTTATTGCTAGGGGATGGTCACAATTCATCAATTATGAGAACAAAAGTAAGACGGCTCTATGATATTGCAAACACCCACGCATCAGTCACCAGAAAACCTGCATTTAGATGGTTGGGATGGAAGGATAGAGCTGGAAAGGAAGCCACTTGTAGTGAACCCCCACCGGAACCTAGGAAAAGGGCATTTGGAATCGATGTAACAAACATCAATTTTAAGAGGAACAGAATTGAAACTTTAGCTAATGAGAACCCGAAGCAGGATATCAATATTACAAAGTCAGCGAAACAAAAAGATTTGATATATGAGGTTGATAGACAAGGTTTGGACAAGGAAAGTAAACAAGGTACAAAGAGCTACCACTTTGGACCTTTTGCACCAGTAACTGTTCCCTTAGATGGTCCTCAGAGTAGCAGCAACGTGAAGGAAAACCCTGATTGGGAGAGCCTTGCCTCTACTTATCGGCCTCAGTATCAGAACCAAGCTTTGAAAGACCTATTCTCTCACTATATGGAAGCATGGAAATCATGGTACTCAGAAGCAGTAAAGAAACCTATAAAGATTTCTTGA 1134 42.68 MAANSSSSTLPESSFSRHHAYSRKQKSLGLLCSNFLSLYNRDGIHSIGLDDAASRLVFVKFTGVERRRIYDIVNVLESVLARRAKNQYSWKGFEAIPVALQHLKEEGLKENFNASDGNDYAKASDDEDEDDTLSNPATGSQNSISSLPKHSSSKSDNRREKSLALLTRNFVKLFICSKVDLISLDEAARLLLGDGHNSSIMRTKVRRLYDIANTHASVTRKPAFRWLGWKDRAGKEATCSEPPPEPRKRAFGIDVTNINFKRNRIETLANENPKQDINITKSAKQKDLIYEVDRQGLDKESKQGTKSYHFGPFAPVTVPLDGPQSSSNVKENPDWESLASTYRPQYQNQALKDLFSHYMEAWKSWYSEAVKKPIKIS 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6357344 6359720 - Bda027597.2 Bda14g00825 20876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00825 377 MobiDBLite consensus disorder prediction 111 157 - -
Bda14g00825 377 MobiDBLite consensus disorder prediction 134 151 - -
Bda14g00825 377 PANTHER TRANSCRIPTION FACTOR E2F 6 369 IPR015633 GO:0000978|GO:0006357
Bda14g00825 377 SUPERFAMILY Winged helix DNA-binding domain 22 90 IPR036390 -
Bda14g00825 377 Pfam E2F/DP family winged-helix DNA-binding domain 160 218 IPR003316 GO:0005667|GO:0006355
Bda14g00825 377 Pfam E2F/DP family winged-helix DNA-binding domain 24 92 IPR003316 GO:0005667|GO:0006355
Bda14g00825 377 SMART E2F_TDP_2 23 92 IPR003316 GO:0005667|GO:0006355
Bda14g00825 377 SMART E2F_TDP_2 158 228 IPR003316 GO:0005667|GO:0006355
Bda14g00825 377 SUPERFAMILY Winged helix DNA-binding domain 160 229 IPR036390 -
Bda14g00825 377 Gene3D - 18 94 IPR036388 -
Bda14g00825 377 Gene3D - 152 229 IPR036388 -
Bda14g00825 377 PANTHER E2F TRANSCRIPTION FACTOR-LIKE E2FF 6 369 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01676 Bda-Chr11:50911377 Bda14g00825 Bda-Chr14:6357344 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17063 PF02319 E2F_TDP 4.20E-10 CL0123 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00825 K09391 - csv:101219210 473.781